| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1516 |
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| Symbol | |
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| ID | 4439272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1508710 |
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| End bp | 1510983 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639673343 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_815309 |
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| Protein GI | 116630137 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.476962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTAGGT TATCAGGAAA GAGAGAAGCA ATGAGCGAAG AAACAATTCT TGCAGAATTA
AATCCGCAGC AAAAAAAAGC TGTGCAGTGT ACTGAGGGTC CACTTTTAGT AGTTGCTGGA
GCTGGTAGTG GAAAAACATC AGTTTTAACA CGTCGAATTG CCTATTTAAT TGAAGAAAAA
GGCGTTGCGC CATGGAATGT CTTAGCCATT ACTTTTACCA ATAAGGCTGC AACTGAAATG
AAAGAACGTG TCCAAAAACT TTTAGGGCCA GCTGCTGATA GTGTTTGGAT GTCAACTTTT
CACGCCTTAT GCGTGAGAAT TTTACGCCGT GATGCAGAAA AGATCGGTTA TTCTAATAAC
TTTTCAATTG CTGATTCGGC GGAACAGTTA ACTTTAATTA AGCGAATTGA AAAAGATCTT
AATATTAATC CTAAAATGTA TGATCCCAAA GCAATTTTAG GTGCTATTTC TAATGGTAAA
AATGACTTGC TTACACCCAA AGATTTCAAA GCGCAAGCAA CTAGTCCCTT TGAAAAGGTA
ACAGCGCAAG TTTATGCGGA ATATCAGCAC CGCTTAAAGC GTGATCAAAT TATGGATTTT
GATGACTTGA TTATGCAAAC GCTAGTCTTG TTTAAGAAAG ATAAAGAAAC GCTTCATTAT
TACCAAAATA AGTTCCGCTA TATTTTAGTT GATGAGTATC AGGATACAAA TGAAGCTCAA
TATCAACTTT GTGTGGCACT AGCTGCTCAG TATAAGAATA TTTGTGTTGT TGGGGATGCG
GACCAGTCAA TCTATGGTTG GCGCGGAGCT AATATGGAAA ATATTCTTAA TTTTGAGCAT
GACTATCAAG ATGATGAAGT TAATACGATT AAACTTGAAC AAAATTATCG TTCGACTGGT
CATATCTTAG ATGCTGCTAA TTCAGTTATT AAGAATAATC AAAATCGTAA GCCTAAAAAG
CTTTGGACTG ATAAGGGCGA TGGTGATAAG ATCAACTATT ATCGTGCTCA AAGTGGTAAC
GATGAAGCAC TCTTTATTGT TTCAAAGATC AACGAAGAAA TAAAAGAGCA TCACAGAGAC
TACAAGGATT TTGCGGTTCT TTACCGCACA AATGCTCAAT CTCGTAACGT CGAAGAAGCT
TTAGTTAAAT CAAACATTCC TTACCGAATT GTTGGCGGTC ATAAATTCTA TGATCGAAAA
GAAATTAAAG ATATCTTGGC CTATTTAAAG GTTGTAGCAA ACCCTGCTGA TTCGATGAGC
TTTAATCGAA TTATTAATGT GCCTAAGCGT GGATTAGGGC CAACAACGAT GGCTAAATTT
AACGGCTTTG CTAATGATAA TGACTTCACA GTTGAAGAAA CATTTAAGAA TTTAAGTTTA
GCACCAATTA CAGGTCGTCC GGCTAAGACT TTAGCAACTT TTGGGACTGC TTTAAAGGAT
GCAATTGAAT ACAGTAAGAC GCATAGCGTA ACTGGTTTAA CTGAAAAATT ACTAGCTGAC
TTTGGCTATA AAGAAGCTTT AGAGAATGAA CATACAATTG AAGCCGATAC TAGATTAGAA
AACTTGAACG AATTCTTAAC CGTTACTAAG CGTTTTGATG ATAATTATGA GCCAGAAGAT
GAAGATTCGA CTGCCTTAGG CGATTTTCTT TCAGAAATTT CACTTTTAAG CGATCAAGAT
GATTTAGAAA ATCAAGATAA TCAGGTAGCT TTAATGACGC TTCATGCAGC TAAAGGATTA
GAGTTTCCAG TTGTCTTTTT GGTTGGCATG GAAGAAGGAC TTTTCCCGCT TTCAAGAGCG
ACAGGCGATC CAAGTGAACT TGAAGAAGAA CGTCGTTTAG CCTATGTAGG TATTACCCGT
GCTGAAAAGA AACTTTACAT CACGAATGCC TTTTCTAGAA CGATGTACGG CCGTCCGCAA
AATAACCAGC CATCTCGCTT TATTGATGAA ATTGAAGATA AAGATCTAGA ATTTGTTAAC
CAAGTTCAGT CTAATTCTGC AATGTCGATT CCTTTTGCTA AAAGTAGTGA ACGTGCAACT
TCTCAAGTTT ACCGTCCAAA AACTAGAATT GAAACTGCTA AGAAGGCTAG CGGTGCAGTT
GGTGCGGACA AGAAGTCTTG GAATGTTGGC GATCAAGTTT CTCATAAGGC CTGGGGAAAA
GGCGTTGTCG TCAAAGTTAA CGGCAGCGGA GAAGATATGG AATTAGATAT TGCTTTTGCT
AGTCAAGGAG TAAAGCGCCT TTTAGCTGCC TTTGCACCAA TTAAAAAGAT ATAA
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| Protein sequence | MFRLSGKREA MSEETILAEL NPQQKKAVQC TEGPLLVVAG AGSGKTSVLT RRIAYLIEEK
GVAPWNVLAI TFTNKAATEM KERVQKLLGP AADSVWMSTF HALCVRILRR DAEKIGYSNN
FSIADSAEQL TLIKRIEKDL NINPKMYDPK AILGAISNGK NDLLTPKDFK AQATSPFEKV
TAQVYAEYQH RLKRDQIMDF DDLIMQTLVL FKKDKETLHY YQNKFRYILV DEYQDTNEAQ
YQLCVALAAQ YKNICVVGDA DQSIYGWRGA NMENILNFEH DYQDDEVNTI KLEQNYRSTG
HILDAANSVI KNNQNRKPKK LWTDKGDGDK INYYRAQSGN DEALFIVSKI NEEIKEHHRD
YKDFAVLYRT NAQSRNVEEA LVKSNIPYRI VGGHKFYDRK EIKDILAYLK VVANPADSMS
FNRIINVPKR GLGPTTMAKF NGFANDNDFT VEETFKNLSL APITGRPAKT LATFGTALKD
AIEYSKTHSV TGLTEKLLAD FGYKEALENE HTIEADTRLE NLNEFLTVTK RFDDNYEPED
EDSTALGDFL SEISLLSDQD DLENQDNQVA LMTLHAAKGL EFPVVFLVGM EEGLFPLSRA
TGDPSELEEE RRLAYVGITR AEKKLYITNA FSRTMYGRPQ NNQPSRFIDE IEDKDLEFVN
QVQSNSAMSI PFAKSSERAT SQVYRPKTRI ETAKKASGAV GADKKSWNVG DQVSHKAWGK
GVVVKVNGSG EDMELDIAFA SQGVKRLLAA FAPIKKI
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