| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1515 |
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| Symbol | |
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| ID | 4439305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1506664 |
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| End bp | 1508670 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639673342 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_815308 |
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| Protein GI | 116630136 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.872196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTT TAACTCACAA TCAGGCTTCT CAGAAAGTCG ATGAATTAAG AAAAAAGCTC
GATGAATGGG CAGAAGATTA TTACGCAAAA GACGCACCAG TAGTTGAAGA TGCGGTTTAC
GACAAGGCTT ATCAAGAACT AGTAGAATTA GAAAAGCAGT TTCCTGACCT AGTAACATCT
GACTCAATTA CGCAGCGAGT TGGTGGTGAG ATCAAGAGTG ACCTTTCTAA AGTGGAACAT
CCCGTTCCAA TGCTTTCAAT GGGGGATGTT TTTTCAAAAG ATGAGCTCAA AGAATTTGAT
GAAAGAATTA CAAAGCTAGT TGGTCATCCT GTGGCTTACA ACGTTGAATT AAAAATTGAT
GGCTTATCTT TGTCGTTAGA ATATACAGCT GGGAAATTAA CACGTGCATC TACTAGAGGA
AATGGCCGTG TTGGTGAAGA TGTGACAGCT AATGCTAAGT TTATTAAGGA TATTCCCCAA
ACTTTGCCTG AGCCTTTAAC AACTGAGGTT CGCGGTGAAT GCTACATGGA AAAAGAAGCA
TTTGCCAAAT TAAATGCGGA ACGTGATGAA AAAGGGGAGC AGGTATTTGC TAATCCTAGA
AATGCAGCTG CTGGTTCTTT AAGGCAATTA GATGCGCGGA TTACTAAAAA GAGAAACTTG
AGTACTTTTA TTTATACTTG GGTTAATCCG CCAAAAAACA TTACTAGTCA GCACCAGGCA
ATTGATGAAA TGAATCGCTT AGGTTTTCAC ACCAATCAAA CTGGCCAGCG TCTGGAATCA
ATGGATGAAG TATTTAAGTT TATTGATGAA TATACTGCTA AGCGTAACGA TTTAAGCTAT
GGTATTGATG GAATTGTTTT AAAAGTTGAC GATTTGAGCT TACAAAATGA ATTAGGAAAT
ACCGTCAAAG TACCGCGCTG GGAAATTGCC TATAAGTTTC CTCCTGAAGA ACAAGAAACG
GTAGTCAAAG AGATTGAATG GACAGTTGGT CGAACTGGAG TAGTAACGCC AACTGCGGTA
ATGGATCCTG TTCAACTCGC TGGTACTGTT GTTTCACGCG CTTCTTTGCA CAATCCTGAT
TACTTAAGAG AAAAGGGAGT ACGGATTGGC GACACAGTTA AATTGCACAA GGCTGGCGAT
ATTATTCCAG AAATTTCTAG TGTCGTTTTA AATAAAAGAC CTAAAGATAG CGAGCCTTAT
CAGATTCCTA ATAAATGTCC ATCTTGTGGG CAAGACTTGG TTCACTTACA AGACGAAGTA
GCACTTCGCT GCATCAATCC AATGTGTCCA GCACAAGTTG AAGAAGGAAT TATCCACTTT
GCTTCACGCG GTGCGATGAA CATCATGGGA CTAGGTCCGC GAATCGTAAA ACAGTTAATT
GATAAGAATT TTGTCAATGA TGTAGCCGAC TTATATCATT TAACTAATGA GCAATTAAGT
CAGTTAGATC ATTTTAAAGA TAAGTCAATT ACTAATTTGT TAACGTCAAT TGAGAATAGT
AAGCAAAATT CAGCTGAATT ATTACTATTT GGTCTTGGAA TAGATCATGT CGGTGCTAAA
GCTGCTAGAT TAATTTTGGA AAAATATAAA AATTTGGAAA AGGTTAGTCA ATTAACAGTG
CCAGAATTAA CAAGTATCGA TACAATAGGA GAGACGATTG CGGAATCGTT AACAGCATAT
TTTAATCAGC CAAGTGCGCA AAAGTTGTTG CAAGAGTTGC GCGACAGTGG ATTAAATATG
GAATATTTAG GAACTGTTGA AGAAGAAGCA CCAGATAATT TCTTTAAAGA AAAGACTGTT
GTTCTAACTG GAAAATTATC AGACTTTACT CGAAGTGAAT TTACTAAGAA ACTGCAAGAT
CTTGGAGCTA AAGTAACTGG ATCAGTATCT AAGAAGACAG ACTATTTAAT TTATGGTGCA
GATGCCGGTT CTAAGAAAGA TAAGGCTGAA AAACTTCAAG TTCCAATGTT AACTGAACAA
GAAGCAATTG CAAAAATTGA AAAATAA
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| Protein sequence | MAVLTHNQAS QKVDELRKKL DEWAEDYYAK DAPVVEDAVY DKAYQELVEL EKQFPDLVTS
DSITQRVGGE IKSDLSKVEH PVPMLSMGDV FSKDELKEFD ERITKLVGHP VAYNVELKID
GLSLSLEYTA GKLTRASTRG NGRVGEDVTA NAKFIKDIPQ TLPEPLTTEV RGECYMEKEA
FAKLNAERDE KGEQVFANPR NAAAGSLRQL DARITKKRNL STFIYTWVNP PKNITSQHQA
IDEMNRLGFH TNQTGQRLES MDEVFKFIDE YTAKRNDLSY GIDGIVLKVD DLSLQNELGN
TVKVPRWEIA YKFPPEEQET VVKEIEWTVG RTGVVTPTAV MDPVQLAGTV VSRASLHNPD
YLREKGVRIG DTVKLHKAGD IIPEISSVVL NKRPKDSEPY QIPNKCPSCG QDLVHLQDEV
ALRCINPMCP AQVEEGIIHF ASRGAMNIMG LGPRIVKQLI DKNFVNDVAD LYHLTNEQLS
QLDHFKDKSI TNLLTSIENS KQNSAELLLF GLGIDHVGAK AARLILEKYK NLEKVSQLTV
PELTSIDTIG ETIAESLTAY FNQPSAQKLL QELRDSGLNM EYLGTVEEEA PDNFFKEKTV
VLTGKLSDFT RSEFTKKLQD LGAKVTGSVS KKTDYLIYGA DAGSKKDKAE KLQVPMLTEQ
EAIAKIEK
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