| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1502 |
|---|
| Symbol | |
|---|
| ID | 4439292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1493892 |
|---|
| End bp | 1494623 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639673330 |
|---|
| Product | integral membrane protein, interacts with FtsH |
|---|
| Protein accession | YP_815296 |
|---|
| Protein GI | 116630124 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.230664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGG GAGAGCTTAT GAATAACTTT TCACAAGAAC CAGAACGTCG CACAATCGTT
GACGTAACTG GCTTAAATAG ATTCTTAAGC AGAATGTACG GCATGATGAC AATCGCCGTT
TTAGTTTCTG CTTTAAGTGC TTACTTAACG ATGACTGTCT TTAGAACTCA AGTAATGACC
TTATTTGCTA GCAACCCAGC AATGACTTGG ATTTTATTGT TAGTTCCACT TGCATTAACT
TTTGGAATTA GCTTTAGAGC AACAAGAAAT CCGGTAGCTA GTTTCGTCAT GTTAATGATT
ATGGCAATTG TTTACGGAGT TGAATTTTCC TTAATTGCTG GTGCCTATAC TGGCCGCAGC
ATTGCTTCTG CATTCGTTGC TTCATCTACT GTTTTCATTA CTATGGCAGT AATTGGTACA
ACTACTAAGA AGAACTTAAA TAATCTTGGC TCTTATGCTT CTGCTGCCTT GATTGGTTTA
ATTGTTGCAA TGCTTATCAA CATGTTCTTA AGAAATCCAA TGGTTTCTTA CATCTTTTCA
TTTATCGCAG TTATTATCTT TACTATTTTA ACTGCTTGGG ATGCACAAAG AATGAAACAA
ATTTACGAAA ACTATGGTGG TCAAGTTTCA GTTGATGGTT TGGCTGTTGC AGGTGCTTTA
GCACTTTACC TAGACTTCGT TAACTTGTTC TTACAGTTCT TACAAATCTT TGGATTTAGC
GACAGAAATT AA
|
|---|
| Protein sequence | MKEGELMNNF SQEPERRTIV DVTGLNRFLS RMYGMMTIAV LVSALSAYLT MTVFRTQVMT
LFASNPAMTW ILLLVPLALT FGISFRATRN PVASFVMLMI MAIVYGVEFS LIAGAYTGRS
IASAFVASST VFITMAVIGT TTKKNLNNLG SYASAALIGL IVAMLINMFL RNPMVSYIFS
FIAVIIFTIL TAWDAQRMKQ IYENYGGQVS VDGLAVAGAL ALYLDFVNLF LQFLQIFGFS
DRN
|
|---|
| |