| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1498 |
|---|
| Symbol | |
|---|
| ID | 4439323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1489854 |
|---|
| End bp | 1490702 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639673326 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_815292 |
|---|
| Protein GI | 116630120 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1912] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000000610491 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 95 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATGGAAA CAAATCATTT TCTAGTATTA CAAACCGACT TCGGTTTAAA AGATGGTGCT
GTTAGCGCCA TGCACGGCGT AGCTCATTTG GTTGCTCCGC ACGTTGCTGT TTCAGATTTA
ACTCATGAGA TTCCGCCTTA TGATATTTGG GCTGCATCTT ACCGCCTCTA CCAGACAATC
AAATATTGGC CCAAAGGCAC AACTTTTGTT TCAGTAGTTG ACCCAGGTGT TGGCTCAGAT
CGAAAGAGTA TCGCAGTTAA AACAAAAAGC GGACATTTTA TTATTACACC TGATAACGGT
TCATTAACAC ATGTTGCAAC TTATATGGGA CTTGAGGAAG TAAGAGAAAT TGATGAACAA
AAGAACCGTC TTCCTTATTC TTCAGAAAGT AATACTTTCC ATGGCCGTGA TATTTACGCT
TATAACGGCG CCCTTTTAGC TGATGGCGAA AAATCATTTG AAGATCTAGG AGAGCCATTA
GATCCAACTT CAGTTGTGAA ATTGCCACTT ACCGAAGCCA AATTAGAAAA TGATCATCTA
ACGGGATCAA TTGATGTATT AGATATTCGC TTTGGTTCTT TATGGACAAA TATTCCTTAT
GACTTAGTTA AAAAAGCCGA TATCAAACGC GGCGACAAAC TTACTGTCAC AATTACTTAT
CAAGGTCAAA CCTATTATCA TGATACAATA CCTTTTGTTA CATCCTTTGC CGATGTAGCA
ATCAAAGATC CATTGATGTA TATCAATTCA TTAGTCAATG TCGGTATTGC ACTAAATCAA
GCTTCATTTG CCGATACCTA CAAAATTGGT ACTGGAAATG ATTGGAAAAT TGATTTAACT
AGAGAATAA
|
|---|
| Protein sequence | MMETNHFLVL QTDFGLKDGA VSAMHGVAHL VAPHVAVSDL THEIPPYDIW AASYRLYQTI
KYWPKGTTFV SVVDPGVGSD RKSIAVKTKS GHFIITPDNG SLTHVATYMG LEEVREIDEQ
KNRLPYSSES NTFHGRDIYA YNGALLADGE KSFEDLGEPL DPTSVVKLPL TEAKLENDHL
TGSIDVLDIR FGSLWTNIPY DLVKKADIKR GDKLTVTITY QGQTYYHDTI PFVTSFADVA
IKDPLMYINS LVNVGIALNQ ASFADTYKIG TGNDWKIDLT RE
|
|---|
| |