| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1493 |
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| Symbol | |
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| ID | 4439318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1485212 |
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| End bp | 1486564 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639673321 |
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| Product | tRNA (uracil-5-)-methyltransferase related enzyme |
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| Protein accession | YP_815287 |
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| Protein GI | 116630115 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00115343 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 105 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA ATCAAATTGT CGATTTAGAA ATTACCGACC TATCTTATGA AGCAATGGGA
GTTGCTCACT TAGACGGCAT GACTGTCTTT GTGAACAATG CTCTTCCAGG TGAGGTTGTT
TCAGCTAAAA TTTTAAAGGT AAAGAAGAAT TTTGCCTTCG CTAAAATTGA GAAAATTAAG
AAGGAAAGTC CAGATAGAAT TAACGTTGAA CGTCGTCAAT GGGTTCAAAC AGGCTTAGCT
TCGCTTGCTC ATATTAAGTA TGATAAGCAA CTTGAGTTTA AACGCAATCA AGTGGTGAAC
CTATTGCACA AGGCCGATTT AGATAATATT AAAGTTAGTC AGACTTTGCC TAGTCCAGAA
GAAACCGGCT ATCGTAATAA GGCACAAGTG CCAGTTCGTG AGGTTCACGG CAAGCTTGAT
ATAGGTTTCT TTAGAAAGCA TTCGCATGAT TTAGTGCCGT TAACTAATTT CTTTACTACT
GATCCGGAGA TTGACCGAGT TTTAATTAAA GTTCGTGATA TTTTAAGAAA GAATCATGTT
CCAGCTTATG ATGAGATTCA CAATAAGGGT GAAGTGCGTT ATCTTGATGT ACGTCGCTCA
AAGGCAAGCG GCGAGATTAT GGTAATTTTG GTCTGCTTGC ACAAGGAGTT TCCACAGTTA
AAGAAGGTAA CTAAGGAAAT TAGTGAGATC AAAGGTGTCA CTAGCGTCGT TTTGAACCAT
AATCCTAAAA AGACTAACGT AATTTTGGGT AAAAAAGATT ATTTGCTTTG GGGAGAGCCT
CAAATTACCG ATAAAATTGG GGATGTTAGT TTTAAGATTT CACCACAAAG TTTCTTCCAA
ATTAATTCGC TGCAAACCCC GCGCTTGTAT GACTTGGCAA TTCAAAAAGC TGATCTTAAA
CCCGATGACG TTGTAATTGA TGCCTATTCT GGAATTGGAA CAATTGGTTT GTCAGTTGCT
AAGCATGTGA AGGCAGTGCG AGGGATGGAA GTTATCAAGC CAGCTGTTGA CGATGCTAAC
GCAAATGCAA AATTAAATGG TATTAACAAC GCTGAATATG TTGTTGGTAA AGCAGAAGAA
GTAATGCCGC GTTGGGCTAA AGAGGGGCTT AAGACTGATG TTATCTTCGT TGATCCACCA
AGAAAGGGAT TAACGCCAGA ATTTATTGAT GCGGCTGTTG AAACTCATCC TAAGAAGATT
GTTTATATTT CATGTAACCC AGCTACAATG GTTAGAGATC TGCAATTGTT CCGTGAGCAA
GGTTATGACT TTAATGAGAT TGATCCTGTC GATATGTTCC CTCAAACTCC CCATGTGGAG
TCTGTTACGG TCCTTGAACG TACAGGAAAA TAG
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| Protein sequence | MQKNQIVDLE ITDLSYEAMG VAHLDGMTVF VNNALPGEVV SAKILKVKKN FAFAKIEKIK
KESPDRINVE RRQWVQTGLA SLAHIKYDKQ LEFKRNQVVN LLHKADLDNI KVSQTLPSPE
ETGYRNKAQV PVREVHGKLD IGFFRKHSHD LVPLTNFFTT DPEIDRVLIK VRDILRKNHV
PAYDEIHNKG EVRYLDVRRS KASGEIMVIL VCLHKEFPQL KKVTKEISEI KGVTSVVLNH
NPKKTNVILG KKDYLLWGEP QITDKIGDVS FKISPQSFFQ INSLQTPRLY DLAIQKADLK
PDDVVIDAYS GIGTIGLSVA KHVKAVRGME VIKPAVDDAN ANAKLNGINN AEYVVGKAEE
VMPRWAKEGL KTDVIFVDPP RKGLTPEFID AAVETHPKKI VYISCNPATM VRDLQLFREQ
GYDFNEIDPV DMFPQTPHVE SVTVLERTGK
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