Gene LGAS_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1475 
Symbol 
ID4439335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1464863 
End bp1467229 
Gene Length2367 bp 
Protein Length788 aa 
Translation table11 
GC content44% 
IMG OID639673304 
Productphage DNA polymerase 
Protein accessionYP_815270 
Protein GI116630098 
COG category[R] General function prediction only 
COG ID[COG3378] Predicted ATPase 
TIGRFAM ID[TIGR01613] phage/plasmid primase, P4 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones154 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGAGGC TTGGTCGTTT GGCAGCCCAA CTCACGATAC ACGCTACTTC ATCCGCCTTG 
CCAAACGGAA GAATAAAGAA GTTCGATACT TTAATACAAG AATGGAGGAT TGCTAAGATG
CACTTTACTT TATCAACAGC AGCCAATTCC GGTCAGGCCA GTAACACTAT TTACCCTAAC
CAGCTAATTA TCACTAACTC CCAAGAATTA CAGCAGGCCG TACAGTATGA CCATGTTTGT
GGGCGGTTCA AGAATAACCA ACGTAACATT GCAAACTTCA TCAAAGCTGA CTGCTTAGTC
ATGGATTGTG ACAATGACCA CTCTGATGAT TCTGCCGCTT GGATTAATCC TACCAGCATT
GCGAATTACT TTGATGGCGT TTCTTATGCC ATTACATTAT CGCGCAACAA CATGAAAGCT
AAGAACAATA AAGCCCCGCG CCCAAAGTTC CACATCTACT TTCCAATTAG CGAGATCAAT
AATGCTAAAA CCTACGCTGA ATTAAAACAT GAAATTCAAG AATATTTCCC CTATTTTGAT
AACAATGCTC TCGATGCTGC CCGCTTCGTA TTTGGTGTTC CCAGTACACA AGTTAGTTGG
CACGAAGGAT CCCAAACCAT CGACCAATTT ATGATGGCGC AACGTTACTT TGCCAAGCAA
AAGGTCGGAT CGATTCGCCA AGGCAAACGC AATGCAACTC TCTCCCACTT TGCTGGTCGA
ATCATTATGC GATTGGGCAA TACTCCCGAA GCACGTCAGG CCTTTCAAGA CGAGGCAGCG
AAGTGTGAAC CGCCACTGGG AGAACAAGAA CTAAGAACCA TCTGGCATAG TGCTATCAAA
TTCGGCCACC GAATGGCCAG TAAAAAAGGT TATATTCCAC CTGAAGAATA TAATCAACCC
AATGATGATC TGCATCCCTA CGATTATTCG GATACTGGCG AGTCCTATGT TTTTGTTAAC
AACTGTAAGG ACCGCGTCTG CTACACCAAC CAGTCAGGTT TTATGTGGTT TGACGGTAAA
ATTTGGCAAG AATCGGAGCC CCTCGCTCTC GGCGAGGTTC AACGCTTTAC TGACAAACAA
CTTGCGGATG CTCAACTACG AGTCACTAAG GCTTACCAAG TGATCCAACA AAATGGCGTA
ACTAGCGCGC TTCAAACGAT GGGCAAAACG AAGGCTAGTC GCACTTTTAA TGATGATCAG
CAAGCTACGT TCAAAGAATA TCAAAACGCC AAGGCTTATG AAGCTTTTAT TCTCAAGGAA
CGGAGCACCC GTGGCATCAA TGGAATCTTG ACTAACGCCC GGCCAAAGTT AGTAAAAGAA
ATCAATGAAT TCGATGCTAA TCCCTTTTTA TTAAACACTC CTGATGGCCC TTACAACCTT
AAACAGGGCA TTCATGGGCA ACAAGAAATT CAAGCCAGCG ATTTGATTAC TAAGTCCACG
TCTTGTGTGC CTGGCAGTCA AGGAAATTCA ATCTGGCAAG AAGCCCTAAA TACATTCTTT
TGTAACGACC TAGCACTAAT AAATTACGTT CAAGAAATTG TGGGACTCGT TGCCATTGGT
CAGGTTTACT TGGAAGCGTT GATTATTGCA TATGGCAGTG GACGAAATGG TAAATCCACT
TTCTGGAACA CAATTGCCAA TGTACTCGGT TCTTATACTG GTCACCTCTC AGCTGATGCC
TTAACAACAG GTGTTCGACG GAATGTCAAA CCAGAAATGG CTGAAGTCAA AGGTAAACGC
TTAATCATCT CTGCTGAGCT GGAAGAAGGC AAACGACTAA ACACTTCGAT TGTCAAACAA
CTCTGTTCAA CTGATGAAAT CTACGCTGAG AAAAAATACA TGAAGCCCTT CTCTTTTACA
CCTAGTCATA CCATCGTTCT CTATACCAAC TACCTGCCTC ACGTGGGCGG TAACGATGAA
GGAATCTGGC GGCGATTGAT CGTAATACCG TTTAAAGCCA CGATTGCCAA ACACAATGAT
ATTAAAAATT ATGCCCAGTA CCTAACCGAA CAAGCCGGTC CGGCAGTGTT GCAATGGATC
ATTGAGGGCG CGCAACGAAT CATTCAACAA AATTACCAGC TAACTACTCC GGCAGCAGTT
ACTAAAGCAG TCAAGGACTA CCACGCCGAT AATGACTGGT TAGGTCATTT TCTCAATGAA
AATTGCGAAC TTGATTCTAG TTATCAGCAA AAATCGGGTG ACCTCTATCA AAAGTACCGA
GAATACTGCC AAGGTATCGG CGAATACACC CGAAGTACCA CTGACTTTTA CACGGCCCTT
AAGAATGCGG GCTTTCAACG TCAACGTAAG AATACTGGAT CCTATGTTCG CGGACTGCGC
TTAAAGGCAT CAGAATTTCT CGACTAG
 
Protein sequence
MRRLGRLAAQ LTIHATSSAL PNGRIKKFDT LIQEWRIAKM HFTLSTAANS GQASNTIYPN 
QLIITNSQEL QQAVQYDHVC GRFKNNQRNI ANFIKADCLV MDCDNDHSDD SAAWINPTSI
ANYFDGVSYA ITLSRNNMKA KNNKAPRPKF HIYFPISEIN NAKTYAELKH EIQEYFPYFD
NNALDAARFV FGVPSTQVSW HEGSQTIDQF MMAQRYFAKQ KVGSIRQGKR NATLSHFAGR
IIMRLGNTPE ARQAFQDEAA KCEPPLGEQE LRTIWHSAIK FGHRMASKKG YIPPEEYNQP
NDDLHPYDYS DTGESYVFVN NCKDRVCYTN QSGFMWFDGK IWQESEPLAL GEVQRFTDKQ
LADAQLRVTK AYQVIQQNGV TSALQTMGKT KASRTFNDDQ QATFKEYQNA KAYEAFILKE
RSTRGINGIL TNARPKLVKE INEFDANPFL LNTPDGPYNL KQGIHGQQEI QASDLITKST
SCVPGSQGNS IWQEALNTFF CNDLALINYV QEIVGLVAIG QVYLEALIIA YGSGRNGKST
FWNTIANVLG SYTGHLSADA LTTGVRRNVK PEMAEVKGKR LIISAELEEG KRLNTSIVKQ
LCSTDEIYAE KKYMKPFSFT PSHTIVLYTN YLPHVGGNDE GIWRRLIVIP FKATIAKHND
IKNYAQYLTE QAGPAVLQWI IEGAQRIIQQ NYQLTTPAAV TKAVKDYHAD NDWLGHFLNE
NCELDSSYQQ KSGDLYQKYR EYCQGIGEYT RSTTDFYTAL KNAGFQRQRK NTGSYVRGLR
LKASEFLD