Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1475 |
Symbol | |
ID | 4439335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1464863 |
End bp | 1467229 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639673304 |
Product | phage DNA polymerase |
Protein accession | YP_815270 |
Protein GI | 116630098 |
COG category | [R] General function prediction only |
COG ID | [COG3378] Predicted ATPase |
TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 154 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGAGGC TTGGTCGTTT GGCAGCCCAA CTCACGATAC ACGCTACTTC ATCCGCCTTG CCAAACGGAA GAATAAAGAA GTTCGATACT TTAATACAAG AATGGAGGAT TGCTAAGATG CACTTTACTT TATCAACAGC AGCCAATTCC GGTCAGGCCA GTAACACTAT TTACCCTAAC CAGCTAATTA TCACTAACTC CCAAGAATTA CAGCAGGCCG TACAGTATGA CCATGTTTGT GGGCGGTTCA AGAATAACCA ACGTAACATT GCAAACTTCA TCAAAGCTGA CTGCTTAGTC ATGGATTGTG ACAATGACCA CTCTGATGAT TCTGCCGCTT GGATTAATCC TACCAGCATT GCGAATTACT TTGATGGCGT TTCTTATGCC ATTACATTAT CGCGCAACAA CATGAAAGCT AAGAACAATA AAGCCCCGCG CCCAAAGTTC CACATCTACT TTCCAATTAG CGAGATCAAT AATGCTAAAA CCTACGCTGA ATTAAAACAT GAAATTCAAG AATATTTCCC CTATTTTGAT AACAATGCTC TCGATGCTGC CCGCTTCGTA TTTGGTGTTC CCAGTACACA AGTTAGTTGG CACGAAGGAT CCCAAACCAT CGACCAATTT ATGATGGCGC AACGTTACTT TGCCAAGCAA AAGGTCGGAT CGATTCGCCA AGGCAAACGC AATGCAACTC TCTCCCACTT TGCTGGTCGA ATCATTATGC GATTGGGCAA TACTCCCGAA GCACGTCAGG CCTTTCAAGA CGAGGCAGCG AAGTGTGAAC CGCCACTGGG AGAACAAGAA CTAAGAACCA TCTGGCATAG TGCTATCAAA TTCGGCCACC GAATGGCCAG TAAAAAAGGT TATATTCCAC CTGAAGAATA TAATCAACCC AATGATGATC TGCATCCCTA CGATTATTCG GATACTGGCG AGTCCTATGT TTTTGTTAAC AACTGTAAGG ACCGCGTCTG CTACACCAAC CAGTCAGGTT TTATGTGGTT TGACGGTAAA ATTTGGCAAG AATCGGAGCC CCTCGCTCTC GGCGAGGTTC AACGCTTTAC TGACAAACAA CTTGCGGATG CTCAACTACG AGTCACTAAG GCTTACCAAG TGATCCAACA AAATGGCGTA ACTAGCGCGC TTCAAACGAT GGGCAAAACG AAGGCTAGTC GCACTTTTAA TGATGATCAG CAAGCTACGT TCAAAGAATA TCAAAACGCC AAGGCTTATG AAGCTTTTAT TCTCAAGGAA CGGAGCACCC GTGGCATCAA TGGAATCTTG ACTAACGCCC GGCCAAAGTT AGTAAAAGAA ATCAATGAAT TCGATGCTAA TCCCTTTTTA TTAAACACTC CTGATGGCCC TTACAACCTT AAACAGGGCA TTCATGGGCA ACAAGAAATT CAAGCCAGCG ATTTGATTAC TAAGTCCACG TCTTGTGTGC CTGGCAGTCA AGGAAATTCA ATCTGGCAAG AAGCCCTAAA TACATTCTTT TGTAACGACC TAGCACTAAT AAATTACGTT CAAGAAATTG TGGGACTCGT TGCCATTGGT CAGGTTTACT TGGAAGCGTT GATTATTGCA TATGGCAGTG GACGAAATGG TAAATCCACT TTCTGGAACA CAATTGCCAA TGTACTCGGT TCTTATACTG GTCACCTCTC AGCTGATGCC TTAACAACAG GTGTTCGACG GAATGTCAAA CCAGAAATGG CTGAAGTCAA AGGTAAACGC TTAATCATCT CTGCTGAGCT GGAAGAAGGC AAACGACTAA ACACTTCGAT TGTCAAACAA CTCTGTTCAA CTGATGAAAT CTACGCTGAG AAAAAATACA TGAAGCCCTT CTCTTTTACA CCTAGTCATA CCATCGTTCT CTATACCAAC TACCTGCCTC ACGTGGGCGG TAACGATGAA GGAATCTGGC GGCGATTGAT CGTAATACCG TTTAAAGCCA CGATTGCCAA ACACAATGAT ATTAAAAATT ATGCCCAGTA CCTAACCGAA CAAGCCGGTC CGGCAGTGTT GCAATGGATC ATTGAGGGCG CGCAACGAAT CATTCAACAA AATTACCAGC TAACTACTCC GGCAGCAGTT ACTAAAGCAG TCAAGGACTA CCACGCCGAT AATGACTGGT TAGGTCATTT TCTCAATGAA AATTGCGAAC TTGATTCTAG TTATCAGCAA AAATCGGGTG ACCTCTATCA AAAGTACCGA GAATACTGCC AAGGTATCGG CGAATACACC CGAAGTACCA CTGACTTTTA CACGGCCCTT AAGAATGCGG GCTTTCAACG TCAACGTAAG AATACTGGAT CCTATGTTCG CGGACTGCGC TTAAAGGCAT CAGAATTTCT CGACTAG
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Protein sequence | MRRLGRLAAQ LTIHATSSAL PNGRIKKFDT LIQEWRIAKM HFTLSTAANS GQASNTIYPN QLIITNSQEL QQAVQYDHVC GRFKNNQRNI ANFIKADCLV MDCDNDHSDD SAAWINPTSI ANYFDGVSYA ITLSRNNMKA KNNKAPRPKF HIYFPISEIN NAKTYAELKH EIQEYFPYFD NNALDAARFV FGVPSTQVSW HEGSQTIDQF MMAQRYFAKQ KVGSIRQGKR NATLSHFAGR IIMRLGNTPE ARQAFQDEAA KCEPPLGEQE LRTIWHSAIK FGHRMASKKG YIPPEEYNQP NDDLHPYDYS DTGESYVFVN NCKDRVCYTN QSGFMWFDGK IWQESEPLAL GEVQRFTDKQ LADAQLRVTK AYQVIQQNGV TSALQTMGKT KASRTFNDDQ QATFKEYQNA KAYEAFILKE RSTRGINGIL TNARPKLVKE INEFDANPFL LNTPDGPYNL KQGIHGQQEI QASDLITKST SCVPGSQGNS IWQEALNTFF CNDLALINYV QEIVGLVAIG QVYLEALIIA YGSGRNGKST FWNTIANVLG SYTGHLSADA LTTGVRRNVK PEMAEVKGKR LIISAELEEG KRLNTSIVKQ LCSTDEIYAE KKYMKPFSFT PSHTIVLYTN YLPHVGGNDE GIWRRLIVIP FKATIAKHND IKNYAQYLTE QAGPAVLQWI IEGAQRIIQQ NYQLTTPAAV TKAVKDYHAD NDWLGHFLNE NCELDSSYQQ KSGDLYQKYR EYCQGIGEYT RSTTDFYTAL KNAGFQRQRK NTGSYVRGLR LKASEFLD
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