Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1468 |
Symbol | |
ID | 4439328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1458118 |
End bp | 1459347 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639673297 |
Product | Zn-ribbon containing protein |
Protein accession | YP_815263 |
Protein GI | 116630091 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 151 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTAATA TGGAATTTTC TGATTTCTTT GACATAATGT GGACTTACCT GGCTGACCCA GAATCTAAAG AAAGCAACAA AGAAGGCCGA CCAGAGTTCC TTAAAAATTT AATTGATATG TTGATCCGTG AACCGCAAAC AGAAGAGGAA GACCAAAAAG CGGAAAACGG AGATTTAAAT CCGTTAAATA ATAAGGAAGC AGACACGATT AACAAGTACT GTTCTGGATC CAGAAAAATT CCAAAAAAAG ATGCAAAAGA TATCTTGAAA AGAATCAGTG ATGGAAATCG ATTTTTTGAA AGAATTGTTT TTGCAGCTCC TGGGGCAAAA AAAGGTATTA GAGATGAACT TAGAAAAAGA AGTTTTAATG TTACTTCTGC TTCATTAGGT AAAGTATGTT TTGACATAAT GAAAGCCTTC CTAGAAAAAT TTAAGGAAGG AAAAAGTTCT GTGACTGAAT CCGATATTGC AGATGATAAA AAGAATGTTA CCTACTTAAA GTTAGTTCAC GATGTTCAAT TTAAATGTCC GCTATGTGGA CGAGAATTGA TTACTGATGG AGATACTGAA GCAATTGCAG GATATGATGT GGTCCATATT TTTCCAGCCA ATCTATCAAT GGAAGGTAAA GCAGAATTTT CCAAAATAAA AAAAGCACCT GAAAATTCAG ATGCTTTGGA AAATAAAATT CCCTTGTGCT TAAATTGTGC AAATCTTTAT CTCGAGAATC CAACATTAAA GAATTATCAA ACCTTAGTTA ATGAAAAAAG ACGTATTGAT ATTGAACACA AACTCGCCAA AGGACTTAAT CAGTTAACCT TAGAAGATAA TTTAATCAAA GCTATAAAGG GCTTAAAAGA GATAAAGCCC GATAAGATTA CTAATTCCAT TTCTTATGAT GCGCATAAGA TAGAAGAAAA GATTAACAAT GACTACCCTT TGCAAGGTGC TGTTCAATTT TATGTTATGG GTTACTACAA CAAAATAAGA GATCAATTCT CAAGTATGGA GGGTAACTCG TTCAGTTTTG ATGACCTGGC CACAACAATT AAATTGGCAT ATATCAAATT TAAACGAGAA GGATTAAGTC AGAGTGAAGT GTTTAATCAT CTGGCTCATT GGATTCTTGA CAAAGAACAT TTGGAAAATG ATTTTATAGA AGCGGCGAGA ATTTTAGTTG CTTTCTTTGT ACAAAATTGT GAGGTGTTTG AAGTTGAAAA TGCCCAGTAA
|
Protein sequence | MINMEFSDFF DIMWTYLADP ESKESNKEGR PEFLKNLIDM LIREPQTEEE DQKAENGDLN PLNNKEADTI NKYCSGSRKI PKKDAKDILK RISDGNRFFE RIVFAAPGAK KGIRDELRKR SFNVTSASLG KVCFDIMKAF LEKFKEGKSS VTESDIADDK KNVTYLKLVH DVQFKCPLCG RELITDGDTE AIAGYDVVHI FPANLSMEGK AEFSKIKKAP ENSDALENKI PLCLNCANLY LENPTLKNYQ TLVNEKRRID IEHKLAKGLN QLTLEDNLIK AIKGLKEIKP DKITNSISYD AHKIEEKINN DYPLQGAVQF YVMGYYNKIR DQFSSMEGNS FSFDDLATTI KLAYIKFKRE GLSQSEVFNH LAHWILDKEH LENDFIEAAR ILVAFFVQNC EVFEVENAQ
|
| |