| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1461 |
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| Symbol | |
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| ID | 4440613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1447971 |
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| End bp | 1449863 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639673291 |
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| Product | SNF2 family DNA/RNA helicase |
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| Protein accession | YP_815257 |
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| Protein GI | 116630085 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 136 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACGA AATCAGATAG TCCAATTATC ATTAAAAATG ATGCGGGCCT GTTTCAATTA
TTAGATGACG ATCACCATAC TCTGAAAACT AAGACTGCTC AGCGCGGCTT AGCAATTTTT
GCTCCTTACT TCGAAGATGC TAAACAACGA ACATTTAAAC AAGATTTGAC TTATGTTCAG
TTACTTGAAT TAGTCAAGAA GCTTAATCGT CGTCTGAAGC GTAAGGGATT ACCCGAAGTC
CAAACGAGTA ATAAGTTTGA TCAGTTTGTA CAGCAACGAC AGTATTACAT TAAAGAACAA
AGTCAGGCTG GGTTAACTAT CAAAGATGGT GATCCTCGTT GGCAGCAAGA ATTTGATAAT
TTCAAAACGA TTGTTAGTCA AGAGATTACG CGGCCATTAA AGCCAGAGCA AGAAAAAGCT
AGTTTCTTTA TGACTATCAT GAAACGAGCC GCTAACTTTT CAGTTCCTGG TGCTGGGAAG
ACTGCCATGA TGTATGGAAC TTTTGCCTAC TTGTCTAGTC CTAGAGTGAA TGAAGTTGAT
AAGCTCCTTG TAGTGTCACC ATTAAATGCA TTCGCTGCCT GGCGGACAGA ATTTGAAGCT
GTGTTTGGAC CAAAACGGCA GCTTCATTAT CTTAATATGC GGGATAAGAA GTACAATAAT
AATCCTGGAG TAGTTAAGCA TGATTGGGTT CAAGCAGATG TGATTACGAT TAACTATGAA
TCTTTACAAA GTAAGCTGAA CATCATCAAT GACTTACTGG ATTCTAAAAC TATGTTAGTT
TTTGACGAAG TTCACCGAGT AAAAGGTGTC GGTGGTCAGC GTGCTAAGGC TGCTCTAAGT
CTTAGTCAGG CACCGCATTA TCGGTACGTT TTAACTGGAA CACCAATTCC AAATGGCTTT
AGAGACATCT ACAACTTTTT GCATTTGATG TACCCTGATG AATACTCATC CTTCTTTGCT
TGGGACCTAA CAACCTTAAA CAATATTGAT TCAGAAGATG TGAACAAAAA ACTGTCATCA
TTTTTCTGGC GGACCAATAA AGAAGATTTA CATGTACCAA AACCCGACCC CGACATTATT
AAAGAAGTTG AACCATCAAA GAATCAGCAG ATGTTGTCAC AGGCTATTTA TGAAACTGAA
AATGGTACTT TGGCTACTTT TATTAGATTG CTGCAAGCTT CAACTAATCC AGAATTACTA
GCAACCAACA TTAACTATAA AGAGTTAGGT CTTGTAGATG CGGATTCTGG TGTTTGGGAT
AAGCAAGCCT CAACTGTGGA AAAAGAAAAT GCCAGCAGTG GGGATGCTTA TAAGAAATAT
AATCTGGCCA AAATTGAGTC ACCCAAGTTT GAACTGGGCA TTGATCTGAT CGACAAACTA
GTTAGCCAGG GTAAAAAAGT TCTTGTTTGG GGGATGTTTG TCGGTACCAT GCAAAAGATT
ACCGATACTC TCAACGGTAT GGGAATCAAG ACTACATTGG TTTATGGTGC TACTCCAAAA
CAAGATCGTG AAGGAATGAT TAATAATTTC CGTACTGGTG ATGCGCAAGT ACTGGTATCG
AATCCTAATA CGTTAGGTGA ATCTATTTCT TTGCATCAAA CTGTGCACGA TGCTGTCTAC
TTTGAATATA ACTTCAACCT GACATTTATG TTGCAGTCGC GGGATCGGAT CAATCGATTG
GGACTATCAG CTGATCAATA CACTCGTTAC TATTATTTGA TGACCAAAGG TGATGTTGCC
CACACTGGCT TTATTGACAG TACAGTGTAT AAGAAGCTGA AGGATAAAGA AAAGGTCATG
CTCGATGCCA TTGATGGTCA ATTGCTTGTT CCGGAATATA CCGATGATTA TCTGCAAGAA
GTTAAGGATA TTGTCATGGG GAGGTATAAA TAA
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| Protein sequence | METKSDSPII IKNDAGLFQL LDDDHHTLKT KTAQRGLAIF APYFEDAKQR TFKQDLTYVQ
LLELVKKLNR RLKRKGLPEV QTSNKFDQFV QQRQYYIKEQ SQAGLTIKDG DPRWQQEFDN
FKTIVSQEIT RPLKPEQEKA SFFMTIMKRA ANFSVPGAGK TAMMYGTFAY LSSPRVNEVD
KLLVVSPLNA FAAWRTEFEA VFGPKRQLHY LNMRDKKYNN NPGVVKHDWV QADVITINYE
SLQSKLNIIN DLLDSKTMLV FDEVHRVKGV GGQRAKAALS LSQAPHYRYV LTGTPIPNGF
RDIYNFLHLM YPDEYSSFFA WDLTTLNNID SEDVNKKLSS FFWRTNKEDL HVPKPDPDII
KEVEPSKNQQ MLSQAIYETE NGTLATFIRL LQASTNPELL ATNINYKELG LVDADSGVWD
KQASTVEKEN ASSGDAYKKY NLAKIESPKF ELGIDLIDKL VSQGKKVLVW GMFVGTMQKI
TDTLNGMGIK TTLVYGATPK QDREGMINNF RTGDAQVLVS NPNTLGESIS LHQTVHDAVY
FEYNFNLTFM LQSRDRINRL GLSADQYTRY YYLMTKGDVA HTGFIDSTVY KKLKDKEKVM
LDAIDGQLLV PEYTDDYLQE VKDIVMGRYK
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