| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1420 |
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| Symbol | |
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| ID | 4439366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1411956 |
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| End bp | 1412786 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639673252 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_815219 |
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| Protein GI | 116630047 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000197606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0000000009572 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGAGA TGCCAGAAGT TGAGACGGTT AGACGCACTT TAACTCCTCT AGTAAAGGGA
AAGACAATTG CCAAGATTAA TATTTGGTAT CCTAAAATTA TAGTTAATGA TCCAGCTGAA
TTTGTTAAAA AATTGACAAA TAAAAGGATC TTAAAAATTG ATCGTTATGG CAAGTATTTA
CTCTTTAGAT TCAATGATGA CTTAACAATG GTTTCGCATT TGCGCATGGA AGGAAAATAT
CATTTAGTTA GTCCTGATAC ACCTAAGGGA AAGCATGAAC ATGTAGAATT TATTTTTACT
GATGGAACTG CCTTACGTTA TGATGATGTG CGAAAATTCG GTAGGATGCA TTTAGTTGAA
ACGGGGACTG AAAGAAAAAC GACTGGAATT CGCCATCTTG GACCTGAACC TAATACTGCT
GAATTTAACT TAAAGTATTT TGTTGATGCC TTGAGCCAGA AGAAAAAGAA TATCAAGAAC
ACTTTATTAG ATCAGACAAT TGTGTGTGGT TTAGGAAATA TTTATGTAGA TGAAGTGCTC
TGGAAGAGTA AAATTCATCC CCTAAGTAGT GCTAAAGCTA TTCCTGCTGA TAAGGTGAAG
AATTTATATC AAAATATTAA CCATACTATC GCTATAGCAA CTAAGGAACG TGGAACTACT
GTTCATACTT ATTTAGATGC TAATGGTGAG ATTGGTGGCT ATCAAAAAAT GCTGCAAGTT
TATGGACATG CTGGTGAAGA GTGCAGTAGT TGCGGCACTA TTTTAGAGAA GATCAAAGTA
AATGGACGCG GAACTACTTT CTGTCCGCAT TGTCAGGTAC TATATAAATG A
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| Protein sequence | MPEMPEVETV RRTLTPLVKG KTIAKINIWY PKIIVNDPAE FVKKLTNKRI LKIDRYGKYL
LFRFNDDLTM VSHLRMEGKY HLVSPDTPKG KHEHVEFIFT DGTALRYDDV RKFGRMHLVE
TGTERKTTGI RHLGPEPNTA EFNLKYFVDA LSQKKKNIKN TLLDQTIVCG LGNIYVDEVL
WKSKIHPLSS AKAIPADKVK NLYQNINHTI AIATKERGTT VHTYLDANGE IGGYQKMLQV
YGHAGEECSS CGTILEKIKV NGRGTTFCPH CQVLYK
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