Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1402 |
Symbol | |
ID | 4439383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1398117 |
End bp | 1398749 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673235 |
Product | HD superfamily NAD metabolism hydrolase |
Protein accession | YP_815202 |
Protein GI | 116630030 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR00488] putative HD superfamily hydrolase of NAD metabolism |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000000595747 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 1.0312e-23 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTCCGCTT ATATATTGAA TCAAGAGGCT TATATCGTGA CTGAAATTAA TTTTACGAAA ACATATTCCC CGTTAACTTC TGCTGAAATT GTTGCTAAAG AAAAAAGCAA TATGGATGAA AAAAGATTTA AGCATTGTAT TGGTGTAAGC AAAACAAGTC GCAAGTTGGC TGAACTTAAT AACTATGATC CAGACAAAGC AGCTTTAGCT GGATTTATTC ATGATTATGC AAAGCAAGTA TCTCCAGAAC GATTTATTAA GGTAATTAAG GAGCAACACT TTGATCAAGA CTTACTTAAC TATAATCGTG CTATTTGGCA TGGCATTGTA GGAGCATATT TCATTGAGAA AGAGTTAAAG ATAACTGACC CTGAAATTTT AACTGCAATT AGACGTCATA CAACAGCTGA TGTTGAAATG ACTATTTTAG ATAAAATTGT CTTTGTTGCT GATTTTATAG AACCAGGACG TGATTTTCCT GGTGTAGAAG AGGCAAGAAA GGTGGCTTAT GACAATTTAG ATGATGGGGT AGGTTTTGAG TTAGCCCATA CGCTTGACTT TTTAATAACT AATAGAAAAA AGATATATCC TAAGACTTTT GCTGCATATA ATAAATGGGC TGTAAAGGAT TAG
|
Protein sequence | MSAYILNQEA YIVTEINFTK TYSPLTSAEI VAKEKSNMDE KRFKHCIGVS KTSRKLAELN NYDPDKAALA GFIHDYAKQV SPERFIKVIK EQHFDQDLLN YNRAIWHGIV GAYFIEKELK ITDPEILTAI RRHTTADVEM TILDKIVFVA DFIEPGRDFP GVEEARKVAY DNLDDGVGFE LAHTLDFLIT NRKKIYPKTF AAYNKWAVKD
|
| |