Gene LGAS_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1402 
Symbol 
ID4439383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1398117 
End bp1398749 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content34% 
IMG OID639673235 
ProductHD superfamily NAD metabolism hydrolase 
Protein accessionYP_815202 
Protein GI116630030 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR00488] putative HD superfamily hydrolase of NAD metabolism 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000595747 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.0312e-23 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCGCTT ATATATTGAA TCAAGAGGCT TATATCGTGA CTGAAATTAA TTTTACGAAA 
ACATATTCCC CGTTAACTTC TGCTGAAATT GTTGCTAAAG AAAAAAGCAA TATGGATGAA
AAAAGATTTA AGCATTGTAT TGGTGTAAGC AAAACAAGTC GCAAGTTGGC TGAACTTAAT
AACTATGATC CAGACAAAGC AGCTTTAGCT GGATTTATTC ATGATTATGC AAAGCAAGTA
TCTCCAGAAC GATTTATTAA GGTAATTAAG GAGCAACACT TTGATCAAGA CTTACTTAAC
TATAATCGTG CTATTTGGCA TGGCATTGTA GGAGCATATT TCATTGAGAA AGAGTTAAAG
ATAACTGACC CTGAAATTTT AACTGCAATT AGACGTCATA CAACAGCTGA TGTTGAAATG
ACTATTTTAG ATAAAATTGT CTTTGTTGCT GATTTTATAG AACCAGGACG TGATTTTCCT
GGTGTAGAAG AGGCAAGAAA GGTGGCTTAT GACAATTTAG ATGATGGGGT AGGTTTTGAG
TTAGCCCATA CGCTTGACTT TTTAATAACT AATAGAAAAA AGATATATCC TAAGACTTTT
GCTGCATATA ATAAATGGGC TGTAAAGGAT TAG
 
Protein sequence
MSAYILNQEA YIVTEINFTK TYSPLTSAEI VAKEKSNMDE KRFKHCIGVS KTSRKLAELN 
NYDPDKAALA GFIHDYAKQV SPERFIKVIK EQHFDQDLLN YNRAIWHGIV GAYFIEKELK
ITDPEILTAI RRHTTADVEM TILDKIVFVA DFIEPGRDFP GVEEARKVAY DNLDDGVGFE
LAHTLDFLIT NRKKIYPKTF AAYNKWAVKD