| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1384 |
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| Symbol | |
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| ID | 4439400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1379196 |
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| End bp | 1379882 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639673217 |
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| Product | membrane-associated serine protease |
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| Protein accession | YP_815184 |
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| Protein GI | 116630012 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000348789 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 4.81213e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAAAT TAAAATTTGG TCGATTTTCT AGCACATTTA TTACAAATAC TATTTTAGTA
GTGCTCTTTA TTGTGTTTAT CCTTGAAACA ATAATGGGTG GATCGACTAA TATTAATACT
TTGCTTCGCT TAGGTGCAAT GAATAATCAG CTTGTTACTG TTGAACATCA ATGGTGGAGG
CTGTTTACTG CTCAATTTTT ACACATTGGG TGGCTACATA TCGCTTCTAA TGCTGTGATG
ATTTATTACG TTGGGCAATT TATGGAGCCT TTGTTAGGGC ACTGGCGATT TTTAAGTGTC
TATTTGCTGT CAGGAATTGG TGGCAATTTA TTAAGTTATG CGTATGGCAG TGATTCTGTA
GTTAGTGCTG GTGCTTCAAC GGCGTTATTT GGACTTTTTG GAGTAGTTAT CGCGCTTTAT
TTAGCTAACC GTGCAATTCC TGCAATTAAT TATTTAGGAA AGCAGGCTTT AGCCTTAGCT
ATTATCAATT TGGCACTTGA TTTATTTGCA AGTCATATTG ATATTTTAGG TCATTTAGGT
GGTTTAATAT CTGGTTTTCT ATTGGGAATA ATTTTTGGTA GTGCACATTT AAGACAATAT
CATCATAAAT TAAGAGTTAT TGCAGCAGTT ATTACAATTA TTTATGTCGT ATTTTGCTTA
CATCAGGGAA TAGTGATTAA TAATTAA
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| Protein sequence | MQKLKFGRFS STFITNTILV VLFIVFILET IMGGSTNINT LLRLGAMNNQ LVTVEHQWWR
LFTAQFLHIG WLHIASNAVM IYYVGQFMEP LLGHWRFLSV YLLSGIGGNL LSYAYGSDSV
VSAGASTALF GLFGVVIALY LANRAIPAIN YLGKQALALA IINLALDLFA SHIDILGHLG
GLISGFLLGI IFGSAHLRQY HHKLRVIAAV ITIIYVVFCL HQGIVINN
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