| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1377 |
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| Symbol | |
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| ID | 4439393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1373596 |
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| End bp | 1374408 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639673210 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | YP_815177 |
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| Protein GI | 116630005 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.110042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00000000000523684 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATTC CTTTTAAAGC TGTTGCTGTT GATATGGATG GAACTTTTTT GAATGATCAG
AGAAGTTATG ATCATCAATT ATTTGATCAA GTTTTAACTA AACTCGAAAA ACATGATATT
AGGTTTATTG TAGCTAGTGG AAGACCATTT GCTCGTCTAA AAAATGATTT TCCAGAATTT
ATTGATCGAA TGGATTTTGT AACTGCTAAT GGTTCTAGAT TAATTGTCGA AGGAAAAGAA
GTTGCTGTTG AAGGATTAAG TAAACAACAA GCTATCGATT TAATTAATTT TGTCCATGAT
AAATATGGCA GTATGGCAAC AATGGCTTAC GGTAGAAAAA AAGCCTATAT TGGAACTGAA
GCGCCTGCAA AGGATAAAGA GTTTTTGCAA TATTTTGCTA AAAAAAGTAC TGAAATCAGT
GACTGGCAGG ATTTACCCGA TGACGTTTTT ATTGAGTTAA CTTTTCACTA TGATAGTAAA
ATTGCAAAAA CTATTGAGCG AGATTTTAAT GAGCAATATG GAAATCTTGT CACTACGTTT
GCTTCTAATC CAGTAGCCAT AGATGCAGTT AAATATGGAA TTAATAAGGC TACTGGATTA
AAAAATCTGC TTGCTCGTTT TAATTTGACC AGTGAAGATT TGATTGCTTT TGGTGATAGT
GGTAATGATA TTGCAATGCT TGATTTTGCT AAGTATAGTT ATGCGATGGA AAATGGCATG
GAAATTGCGA AAGAACATGC CAGATATCTT GCTCCTAGCA ATAACGATAA TGGTGTATTG
CAGGTCTTAA ATAAATATCT GGATAAAAAT TAA
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| Protein sequence | MKIPFKAVAV DMDGTFLNDQ RSYDHQLFDQ VLTKLEKHDI RFIVASGRPF ARLKNDFPEF
IDRMDFVTAN GSRLIVEGKE VAVEGLSKQQ AIDLINFVHD KYGSMATMAY GRKKAYIGTE
APAKDKEFLQ YFAKKSTEIS DWQDLPDDVF IELTFHYDSK IAKTIERDFN EQYGNLVTTF
ASNPVAIDAV KYGINKATGL KNLLARFNLT SEDLIAFGDS GNDIAMLDFA KYSYAMENGM
EIAKEHARYL APSNNDNGVL QVLNKYLDKN
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