Gene LGAS_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1358 
Symbol 
ID4439444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1355316 
End bp1355969 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content33% 
IMG OID639673191 
Productadaptor protein 
Protein accessionYP_815158 
Protein GI116629986 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG4862] Negative regulator of genetic competence, sporulation and motility 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00058732 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.0135974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGTAC ATAGAATAAG TGAGAATACC ATTCGTGTAA CAATGGATGC GGATGAACTT 
AAAGAGCGTG GTATAACAAT GCTCGATTTA TTAGGAAATA AAAGTCAAAT TCAACATTTT
TTCTATCAAA TTTTAAGTGA AGTCGATACA GATCATACTT TTGCTAAAGG CGATCCAGTT
ACTTTTCAAG TTATGCCAAG TAGTTCTGGA TTAGAGTTAC TTATTTCCAA AGTACCGGAC
AGTGATGAAG ATGTCAGTGA TAATCCCAAT GATCAATTAC GTGACCTGTT AAAGGGATTG
GGGGCTGGAT CAGATAATGA TGATCGTAAA ACAGAAATTA ATGATCAAGA TAAACTAATT
AGCGATAATC GTAGAGTCTT TAAGATTGAT AGTATTGATT TAGTTGCTGC CCTAGCAGAT
GCATTAAAGG TTGATGGTTT AGCATCTAGT CTATATACAT ATCATCATGA ATATTATTTA
GACTTAGCCT ACTTAGATGA CAATTATGTT GAACTGAAGC CAGAAGATAC TTGGGTAATA
GCTAATGAAT ATGGAAATGG AATGACAGAA AAGCAATTCC AAAAAATAAA GAAAAATGCT
AAGTGCTTGA TTAGACAAGA TGCTCTGGGA AACCTAAGAC AATATTTTGA TTAA
 
Protein sequence
MEVHRISENT IRVTMDADEL KERGITMLDL LGNKSQIQHF FYQILSEVDT DHTFAKGDPV 
TFQVMPSSSG LELLISKVPD SDEDVSDNPN DQLRDLLKGL GAGSDNDDRK TEINDQDKLI
SDNRRVFKID SIDLVAALAD ALKVDGLASS LYTYHHEYYL DLAYLDDNYV ELKPEDTWVI
ANEYGNGMTE KQFQKIKKNA KCLIRQDALG NLRQYFD