Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1358 |
Symbol | |
ID | 4439444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1355316 |
End bp | 1355969 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639673191 |
Product | adaptor protein |
Protein accession | YP_815158 |
Protein GI | 116629986 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [T] Signal transduction mechanisms |
COG ID | [COG4862] Negative regulator of genetic competence, sporulation and motility |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00058732 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.0135974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGTAC ATAGAATAAG TGAGAATACC ATTCGTGTAA CAATGGATGC GGATGAACTT AAAGAGCGTG GTATAACAAT GCTCGATTTA TTAGGAAATA AAAGTCAAAT TCAACATTTT TTCTATCAAA TTTTAAGTGA AGTCGATACA GATCATACTT TTGCTAAAGG CGATCCAGTT ACTTTTCAAG TTATGCCAAG TAGTTCTGGA TTAGAGTTAC TTATTTCCAA AGTACCGGAC AGTGATGAAG ATGTCAGTGA TAATCCCAAT GATCAATTAC GTGACCTGTT AAAGGGATTG GGGGCTGGAT CAGATAATGA TGATCGTAAA ACAGAAATTA ATGATCAAGA TAAACTAATT AGCGATAATC GTAGAGTCTT TAAGATTGAT AGTATTGATT TAGTTGCTGC CCTAGCAGAT GCATTAAAGG TTGATGGTTT AGCATCTAGT CTATATACAT ATCATCATGA ATATTATTTA GACTTAGCCT ACTTAGATGA CAATTATGTT GAACTGAAGC CAGAAGATAC TTGGGTAATA GCTAATGAAT ATGGAAATGG AATGACAGAA AAGCAATTCC AAAAAATAAA GAAAAATGCT AAGTGCTTGA TTAGACAAGA TGCTCTGGGA AACCTAAGAC AATATTTTGA TTAA
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Protein sequence | MEVHRISENT IRVTMDADEL KERGITMLDL LGNKSQIQHF FYQILSEVDT DHTFAKGDPV TFQVMPSSSG LELLISKVPD SDEDVSDNPN DQLRDLLKGL GAGSDNDDRK TEINDQDKLI SDNRRVFKID SIDLVAALAD ALKVDGLASS LYTYHHEYYL DLAYLDDNYV ELKPEDTWVI ANEYGNGMTE KQFQKIKKNA KCLIRQDALG NLRQYFD
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