Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1346 |
Symbol | |
ID | 4439432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1344047 |
End bp | 1344676 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639673179 |
Product | rRNA methylase (SpoU class) |
Protein accession | YP_815146 |
Protein GI | 116629974 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 107 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTATAG AATTAAACGT GGTACTTGCC TCATTACAGG TGCTACGCTT TTTTTACAAG AGGAGCTTTT TTATGACAAA TCACGTTGTA CTTTATGAGC CATTAATGCC TGCAAATACA GGAAATATTG CTCGAACTTG TGCGGGTACT AATACAATCT TAGATCTTAT TGAACCGCTC GGCTTTCAAA TTGATAATAA AAAAATGAAA CGTGCAGGAT TAGATTATTG GGATAAAGTA GACATAAGAA TGCATGATGA CTTAGATGCC TTTTTAAAGA CTCTTGGTCC AAATGATGAA ATGTATTTAA TTTCAAAATT TTCTTCAAAA AATTATGCTC AAGTAGACTA TACTGATCCT AATAAAGATT ATTATTTTGT TTTCGGAAAG GAAACAACTG GTTTACCAGA AACTTTTATG CGAGAATATT ATGATCGTAA TCTTAGGATT CCTATGTCAG ATAATATTCG TTGCTATAAT TTATCAAATT CAGTAGCGAT GGTTCTTTTA GAAGCTTTGA GACAGCAAGG TTTTCCAAAT ATGGAAACGA GCCATCATTA TGAAAATGAT AAGTTAAAGG ATAATTATAA TCGTCCTGAA CGTTATGAAA GAAATTTAGG AGAGAATTAA
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Protein sequence | MSIELNVVLA SLQVLRFFYK RSFFMTNHVV LYEPLMPANT GNIARTCAGT NTILDLIEPL GFQIDNKKMK RAGLDYWDKV DIRMHDDLDA FLKTLGPNDE MYLISKFSSK NYAQVDYTDP NKDYYFVFGK ETTGLPETFM REYYDRNLRI PMSDNIRCYN LSNSVAMVLL EALRQQGFPN METSHHYEND KLKDNYNRPE RYERNLGEN
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