| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1337 |
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| Symbol | |
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| ID | 4439458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1333337 |
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| End bp | 1334959 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639673170 |
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| Product | phosphodiesterase |
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| Protein accession | YP_815137 |
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| Protein GI | 116629965 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000127735 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 142 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAATA CAATTTTAGT TCCTGTTGCT GTCGCTATTG TTTCTGTCTT AGTTGGAGGT
TGTGCGGGTT ATAGTCTTCG TAAGAATAAA TGGGAGACTC AAGCTCAGAA TGCAGCCCAT
GATGCAAAAC ACATCTTGGC AGATGCAGAA AGTAAGGCTA AAGCTGTAGA GGCTGATCTT
GCTTCTCAAC AAGAAGCAAT GAAGAAAGCC GCAGCTGATG CGAAAAAAGA GAAAATCTTG
GAAGCCCAAG AAGAAATTCA TCATTATCGT GAAAGAGTAG ATAATGAATT GAATGAGCGG
CGACAAGAAG TTTCTCGACA AGAAAATCGC TTACTGCAAC GTGAAGATGC TATTGATCAT
AAAGATAGTT TGTTGGATCA AAAAGATTCA CAACTCACAC AAAAGGAAAA CCAAATTAAA
AAATTGCAGG CTCAAGTTTT AGAAAAAGAA AAAAGAGCTG ATCAATTAGT GACCGAGCGA
GAGCAGAAGC TCTATGAAGT TGCAGAGTTA AGTCAAGAAG ATGCTAAAAA GATCGTTTTA
GATAAGCTTT CTGACCAATT GGTTAAAGAG AGAGCAGAAA TGATTGAAGA AAGTAATCAA
CTTGCTAAGG CAAAAGCAGA TCATTTTGCT CGTAAAGTAA TTGTCGATGC AATTCAAAGT
AGTGCAGCTG ATACAGTTTC TGAAAAGACT GTTTCAGTAG TTAATTTACC AAACGATGAT
ATGAAAGGTC GTATCATCGG TCGTGAAGGT AGGAATATTC GCTCATTTGA GGCTTTAACT
GGTGTAGATG TGATTATTGA TGATACACCG GATGTAGTGG TCTTAAGTGG TTTTGATCCA
ATTAGACGTG AAATTGCGAA AAGAGCATTA GAGCGTTTGA TTAAGGATGG CCGGATTCAC
CCAGCACGGA TTGAAGAAAT GGTTGATCGA GCTCGTAAAG AAGTGAATGA TGATATTTAC
GAAGCTGGAG AGAGCGCTTT AATGGAGCTT GGAATTCATA AGATGCATCC AGAATTAGTA
AAAATTTTGG GACGCTTAAA GTATCGTACG TCTTATGGAC AAAATGTTTT ATCTCATTCT
ATTGAGGTGG GTAAATTAAC TGGTGTTATG GCTGCTGAAC TTGGTTTAGA CGAAAAAATA
GCGGTACGCG CGGGATTATT ACACGATATT GGGAAATCAA TTGATCATGA AATTGAAGGA
TCCCATGTAG AAATTGGTGT TGAACTTGCA CGGAAGTATC ATGAACCAGA TTTGGTTGTG
AATGCGATTG CTGCTCACCA CGATGATGTT CCTAAATTAT CATTTATTGC AGAACTAGTT
GTGGCTGCTG ATACAATTTC TTCAGCTCGT CCAGGCGCTA GAAGCGAATC CCTAGAAAAT
TATATTCGTC GTTTAGAGCA ACTGGAAACA ATAGCTAAAG GACATATTGG TGTAAAGCAA
GCATATGCAA TTCAAGCAGG TCGTGAAATA AGAGTGATGG TCGAGCCTGA TAAAATTTCG
GATGCTCGAA CTACTATTCT TGCTCATGAC ATTAAAAACC AAATTGAACA AGATATGGAA
TATCCTGGTA ACATTAAAGT TACAGTTATT CGAGAAAAAC GTGCTGTTGC AATAGCAAAA
TAA
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| Protein sequence | MINTILVPVA VAIVSVLVGG CAGYSLRKNK WETQAQNAAH DAKHILADAE SKAKAVEADL
ASQQEAMKKA AADAKKEKIL EAQEEIHHYR ERVDNELNER RQEVSRQENR LLQREDAIDH
KDSLLDQKDS QLTQKENQIK KLQAQVLEKE KRADQLVTER EQKLYEVAEL SQEDAKKIVL
DKLSDQLVKE RAEMIEESNQ LAKAKADHFA RKVIVDAIQS SAADTVSEKT VSVVNLPNDD
MKGRIIGREG RNIRSFEALT GVDVIIDDTP DVVVLSGFDP IRREIAKRAL ERLIKDGRIH
PARIEEMVDR ARKEVNDDIY EAGESALMEL GIHKMHPELV KILGRLKYRT SYGQNVLSHS
IEVGKLTGVM AAELGLDEKI AVRAGLLHDI GKSIDHEIEG SHVEIGVELA RKYHEPDLVV
NAIAAHHDDV PKLSFIAELV VAADTISSAR PGARSESLEN YIRRLEQLET IAKGHIGVKQ
AYAIQAGREI RVMVEPDKIS DARTTILAHD IKNQIEQDME YPGNIKVTVI REKRAVAIAK
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