| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1331 |
|---|
| Symbol | secA |
|---|
| ID | 4439452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1326247 |
|---|
| End bp | 1328646 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639673164 |
|---|
| Product | preprotein translocase subunit SecA |
|---|
| Protein accession | YP_815131 |
|---|
| Protein GI | 116629959 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.313572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 159 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATA TTCTTAAAAA AATTTATGAC AATGACAGAA GAGAATTAAA AAAATTTGAA
AAATTAGCAA CTAAGGTAGA ATCTTTAGCA GATGAATATG AGAAATTGTC TGATGAACAA
TTACAAGCAA AGACACCTGA ATTTCGTAAG CGTTTAGAAA AGGGCGAGAC GTTAGACGAT
CTTTTACCAG AAGCTTTTGC AACAGCACGT GAAGGAGCTA AGAGAGTTTT AGGATTATAT
CCTTTCCGTG TTCAGATCAT TGGTGGTATT GCACTTCACT ACGGTAATAT TGCAGAAATG
ATGACTGGTG AAGGTAAAAC CCTAACAGCT ACTTTACCTG TTTATTTAAA TGCTTTAACA
GGTAAAGGCG TTCATGTTGT AACGGTTAAC GAATATTTAT CAAGCCGTGA CGAAAGTGAA
ATGGGCCAAC TATATAAGTG GCTTGGCTTG ACTGTAGGTT TAAACCTTAA TTCTATGTCT
GCTGATGAAA AGCGAGACGC TTATAACTGC GATGTTACTT ACTCCACTAA CTCTGAGTTA
GGATTTGATT ATTTAAGAGA TAACATGGTT GTCTACAAGG ATCAAATGGT ACAACGTCCG
CTTAACTATG CGATTATCGA TGAGGTTGAC TCAATTTTAA TCGATGAAGC TAGAACACCT
TTAATTATTT CTGGACAAGC TGAGCAAGCT AATAGTGAAT ATATTCGTGC AGACCGTTTT
GTTAAGACTT TAACTGAAGA TAAAAGTGAT GATGATGCGG ATGATGATGA AGATCACGGT
GATTACAAGA TTGATTGGCC AACTAAAACT ATTAATTTGA CCAATCAAGG AATTAAAAAG
GCTTGTGAAC ATTTCGGCTT AAAGAACTTA TATGATATTG ACAATCAAGT TTTAGTTCAC
CATATTGACC AAGCGTTAAG AGCTAACTAC ATTATGTTAA AAGATATTGA CTATGTAGTT
CAAAATGGCG AAGTCATGAT CGTTGATTCC TTTACTGGAC GTGTAATGGA AGGACGTCGC
TATTCTGATG GACTTCACCA AGCAATCGAA GCTAAAGAAG GAGTTAAGAT TCAAGAAGAA
TCAAAGACTC AAGCAACCAT TACTTACCAG AACTTCTTTA GAATGTACAA AAAACTTGCG
GGTATGACAG GTACAGCTAA AACAGAAGAA GAAGAATTCC GTGAAATTTA TAACATGGAA
GTAATTACTA TTCCAACTAA CCGTCCAATT GCTCGTAAAG ATTTACCTGA TATTTTGTAT
CCAACTTTAG ATTCTAAATT TGAAGCTGTA GTAAAGGAAA TTAAGGAGCG ACACGCTAAA
GGACAACCTG TTTTGGTTGG TACTGTGGCG ATTGAAAGTT CTGAGCGCTT AAGTAAAATG
CTTGATCAAG CTGGTATTCC ACATGCTGTT TTGAATGCCA AGAATCATGC TAAAGAAGCA
GAAATTATTA TGAATGCTGG TCAAAGAGGA GCAGTAACTA TTGCTACTAA CATGGCAGGT
CGTGGTACTG ATATCAAGTT AGGGCCTGGT GTAAAAGAGT TAGGTGGCTT GGCAGTTATT
GGTACTGAAC GTCATGAATC TCGTCGTATT GATAACCAGC TACGTGGTAG ATCTGGTCGA
CAGGGTGATC CTGGTGTAAC AAGATTTTAT CTTTCTCTAG AAGACGATTT AATGAAGCGC
TTTGGCGGGG ATCGAGTAAA ATTATTCCTT GATCGAATTT CTGATAATGA TGATGATAAA
GTAATTGAAT CACGTATGAT CACTAAACAA GTTGAATCAG CGCAAAAACG TGTTGAAGGT
AATAACTATG ATACTCGTAA GCAGACCTTG CAGTATGATG ATGTTATGCG TACTCAGCGT
GAAATTATCT ATGGGGAAAG AATGCAGGTT ATTTCTGAAG AAAAAACATT GAAACCTGTG
TTAATGCCAA TGATTAAACG AACTATCGAT CATCAAGTTG ATATGTACAC GCAAGGTGAT
AAAAAGGATT GGCGTAACGA TCAATTAAGA GACTTTATTT CATCGGCCAT TACTGATGAA
GAAACTACTA AGAAACTTAA TATTAAGCAC TTAGGTGCTG AAGAACTGAA AAAGCGTCTT
TACAAGATTG CCGAAGATAA TTACGCCGAA AAAGAAAAAC AACTGGCTGA TCCTGAGCAA
ATGCTAGAAT TTGAAAAAGT TGTTATTTTG CGTGTCGTAG ATGAACGCTG GACTGATCAT
ATTGATGCGA TGGATCAATT ACGTCAATCT ATTAGTTTGA GAGGATATGG ACAACTTAAT
CCATTAGTTG AATATCAAGA AGCAGGCTAT AGAATGTTTG AAGAAATGAT CAGTGATATC
GAATTTGATG CCACCCGTCT ATTCATGAAG GCTCAAATAC GACAAAACAT TAGTCGATAA
|
|---|
| Protein sequence | MANILKKIYD NDRRELKKFE KLATKVESLA DEYEKLSDEQ LQAKTPEFRK RLEKGETLDD
LLPEAFATAR EGAKRVLGLY PFRVQIIGGI ALHYGNIAEM MTGEGKTLTA TLPVYLNALT
GKGVHVVTVN EYLSSRDESE MGQLYKWLGL TVGLNLNSMS ADEKRDAYNC DVTYSTNSEL
GFDYLRDNMV VYKDQMVQRP LNYAIIDEVD SILIDEARTP LIISGQAEQA NSEYIRADRF
VKTLTEDKSD DDADDDEDHG DYKIDWPTKT INLTNQGIKK ACEHFGLKNL YDIDNQVLVH
HIDQALRANY IMLKDIDYVV QNGEVMIVDS FTGRVMEGRR YSDGLHQAIE AKEGVKIQEE
SKTQATITYQ NFFRMYKKLA GMTGTAKTEE EEFREIYNME VITIPTNRPI ARKDLPDILY
PTLDSKFEAV VKEIKERHAK GQPVLVGTVA IESSERLSKM LDQAGIPHAV LNAKNHAKEA
EIIMNAGQRG AVTIATNMAG RGTDIKLGPG VKELGGLAVI GTERHESRRI DNQLRGRSGR
QGDPGVTRFY LSLEDDLMKR FGGDRVKLFL DRISDNDDDK VIESRMITKQ VESAQKRVEG
NNYDTRKQTL QYDDVMRTQR EIIYGERMQV ISEEKTLKPV LMPMIKRTID HQVDMYTQGD
KKDWRNDQLR DFISSAITDE ETTKKLNIKH LGAEELKKRL YKIAEDNYAE KEKQLADPEQ
MLEFEKVVIL RVVDERWTDH IDAMDQLRQS ISLRGYGQLN PLVEYQEAGY RMFEEMISDI
EFDATRLFMK AQIRQNISR
|
|---|
| |