Gene LGAS_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1324 
Symbol 
ID4439479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1319825 
End bp1320817 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content41% 
IMG OID639673157 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_815124 
Protein GI116629952 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones185 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTAT TAGTTATCGG TGGGGCCGGT TATATCGGCT CTCACGCTGT TAGAAAGTTA 
ATTGAAGAAG GCAACGATGT CGTTGTCCTT GATTCTCTCT ACACTGGCCA CAGAAAGGCT
GTTGACAAGA AAGCTAAGTT TTACCAAGGC GATATTGAAG ATACTAATTT AGTAAGCAAG
ATCTTACGTG ATGAAAACAT TGATGCTGTA ATGCACTTCG CCGCTTACTC ATTAGTTCCT
GAATCAGTTA AGAAACCATT GAAGTACTAC GACAATAACG TTTCAGGTAT GATTTCTCTT
CTGCAAGCAA TGGACGACGC TAAAGTTAAG TACTTAGTAT TCTCATCTTC TGCTGCAACT
TATGGCATTC CAAAGACATT GCCAATTACT GAAGATACAC CGCTTGATCC AATCAATCCA
TACGGTGAAA CTAAGATGAT GATGGAAAAG ATTATGCACT GGGCTGACAA GGCTGACGGC
ATTAAGTCAA TTGCTCTGCG CTACTTTAAT GTGGCTGGCG CTTCAAGCGA TGGTTCAATT
GGTGAAGACC ATGGTCCTGA AACTCACTTA ATTCCAAACA TCTTAAAGAG TGCTATTTCT
GGTGATGGCA ATTTCACTAT TTTTGGTGAC GACTATGACA CTAAAGACGG TACTAATGTC
CGCGACTATG TTCAAGTTGA AGACTTAATT GACGCTCACA TCTTAGCACT TAAGCATGTA
ATGGAAACTA ACAAGTCTGA TGTCTTTAAC TTAGGTACTG CTCAAGGTTA CTCAAACTTA
GAAATCCTTG AAGCTGCTAA GAAAGTTACT GGCATTGACA TTCCTTACAC TATTGGACCA
AGAAGAGGTG GAGATCCTGA TTCCTTAGTT GCTGACTCAA GCAAGGCTCG TAAAGTCTTA
GGCTGGAAGC CAAAGCATGA AAATGTTGAC GATGTAATCG CAACTGCTTG GAACTGGCAC
AAGAGCCACC CAAAGGGTTA CGAAGATAAG TAA
 
Protein sequence
MRVLVIGGAG YIGSHAVRKL IEEGNDVVVL DSLYTGHRKA VDKKAKFYQG DIEDTNLVSK 
ILRDENIDAV MHFAAYSLVP ESVKKPLKYY DNNVSGMISL LQAMDDAKVK YLVFSSSAAT
YGIPKTLPIT EDTPLDPINP YGETKMMMEK IMHWADKADG IKSIALRYFN VAGASSDGSI
GEDHGPETHL IPNILKSAIS GDGNFTIFGD DYDTKDGTNV RDYVQVEDLI DAHILALKHV
METNKSDVFN LGTAQGYSNL EILEAAKKVT GIDIPYTIGP RRGGDPDSLV ADSSKARKVL
GWKPKHENVD DVIATAWNWH KSHPKGYEDK