Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1319 |
Symbol | |
ID | 4439474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1313006 |
End bp | 1314730 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673152 |
Product | phosphomannomutase |
Protein accession | YP_815119 |
Protein GI | 116629947 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0182628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 160 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAA AAGAAATTTA TAGTCAATGG ACTAATGCAA ATAATTTACC TGATTATTTA AAAGATCAAT TAGACAAATT AGGTAAAGAT GAAAAGTGGA TTGAAGATGC TTTCGGACAA GATATTAATT TTGGTACTGC TGGGATGAGA GGCCGGCTTG AACCAGGTAC TAACAGAATT AACTTGTTTA CTGTGGGAAG AGTAACCGAA GGTCTTGCCA GATTAATTGA CGAAAATGGT GAAGAAGCTA AAAAACGTGG TGTCGCAATT TCTTTTGATT CACGTTATCA CTCAAGGGAG TTTGCTGAGC ATGCTGCTCG TATTTTAGGT GCACATGGAA TTCATGTTTA CTTATTTGAT GATTTAAGAC CAACCCCTGA ATTGTCATTT GCTGTTCGTC ATTTAAATAC TTTTGCTGGA ATTAATATCA CTGCTTCGCA TAATGCTAAG CAATATAACG GCTACAAGGT ATATGGTGAA GATGGTGCTC AAATGGCTCC AGAAAACGCC GATCGTTTGT TTGCTTACGC TCAAAAAGTT GATGATATTT TTGGTGTTAA AGCTGCTCCA GTAGAAGAAT TACGTGCTAA TGGTACATTA CAATTAATTG GTGAAGATGT GGATGAAGCT TACTTAGCTC ATTTGAAGGA TGTTACTGTT GATCCTGAAA TGGTTAAAGC TAACGCTGAT AAGCTAAAGA TTATTTATAC TCCATTGCAT GGTACTGGTA AGATGCTCTA CGATCGCGCA TTCAGACAAG GCGGTTTTGA TAATGTAATT CCAGTTCCAA GTCAATCAAT TATTGATCCT GAATTTCCTA CAACTATTAA GCCAAATCCT GAATACCGTG ATGTGTTTGA ACCAGGCTTT AAGTTAGCTA ATGAAGTAGA TGCAAATGTT ATTATTGCAA CCGACCCAGA TGCTGATAGA ATGGGTGCTG CTGTTAGAAA ATCAGATGGT GATTTCCAAG TTTTAACTGG TAATCAAATT GCTACTTTAA TGGCATACTA CTTATTAGTT CACATGAAAG AAAACGGAAC TTTATCACCT GATTATGAAT TAGTAACTTC AGTAGTTTCT AGTGCACTTC CATTTAAGAT CGCTGATGAC TTTGGGATTA AGACCAAGCA TGTCTTAACT GGATTCAAGT ACATTGGTGA AGAAGTTGAC CGCATGAATA AAGAAAATGA CGGTAAATTC TTAATGGGCT TTGAAGAAAG TTACGGTTAC TTATTCAAAC CATTTGCCAG AGACAAAGAT GCTATGCAAG GTGCATTGAT GTTTGCAGAA GTGGCAAGTT ACTATGCATC TAAAGGCATG ACTGTTTTTG ATGGCTTGCA AGAAATTTGG CAAAAGTATG GTGTAGCTTA CGAAATCACC AAGGCCATTG AAATGCCAGG TATTGGTGGC CAAAAGAAGA TGGCTGAATT AATGAGTAAA TTGCGTAAAG AACACTTAAC TGAAATTAAT GGTGCCAAAG TTGTTAAGAT CCAAGACTTT GAAACTCAAG AAACCATTGA AGGCGATAAG AAGACACCAT TAACTGGATT TCCTAAATCT AATGTCTTAA AGTACTTCTT AGATGATGAA ACTTGGGTTG CTCTTCGTCC ATCAGGAACT GAACCTGTAA TTAAGGCTTA TGTTGGTGTA AATAAGAAGG ATATTGAAAC TGCAGAAAAA GCAGCTGAAG AATATCAAGA TGCATTAGCA AATTTATTAA AGTAA
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Protein sequence | MNAKEIYSQW TNANNLPDYL KDQLDKLGKD EKWIEDAFGQ DINFGTAGMR GRLEPGTNRI NLFTVGRVTE GLARLIDENG EEAKKRGVAI SFDSRYHSRE FAEHAARILG AHGIHVYLFD DLRPTPELSF AVRHLNTFAG INITASHNAK QYNGYKVYGE DGAQMAPENA DRLFAYAQKV DDIFGVKAAP VEELRANGTL QLIGEDVDEA YLAHLKDVTV DPEMVKANAD KLKIIYTPLH GTGKMLYDRA FRQGGFDNVI PVPSQSIIDP EFPTTIKPNP EYRDVFEPGF KLANEVDANV IIATDPDADR MGAAVRKSDG DFQVLTGNQI ATLMAYYLLV HMKENGTLSP DYELVTSVVS SALPFKIADD FGIKTKHVLT GFKYIGEEVD RMNKENDGKF LMGFEESYGY LFKPFARDKD AMQGALMFAE VASYYASKGM TVFDGLQEIW QKYGVAYEIT KAIEMPGIGG QKKMAELMSK LRKEHLTEIN GAKVVKIQDF ETQETIEGDK KTPLTGFPKS NVLKYFLDDE TWVALRPSGT EPVIKAYVGV NKKDIETAEK AAEEYQDALA NLLK
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