| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1318 |
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| Symbol | |
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| ID | 4439473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1310893 |
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| End bp | 1312908 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639673151 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_815118 |
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| Protein GI | 116629946 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000791691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 153 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGAC GACAAAAAAA CAAGAAATTT GAACTTGTCT CTAAGTTTCA ACCAGCAGGT
GATCAAGAGC AAGCAATTAA AAAGTTGACT GATGGTTTTG AACAAGGTGA AAAGGCGCAG
ATTTTAGAGG GTGCTACAGG AACTGGTAAA ACTTTTACTA TGGCGAATGT AATTGCCAAA
TTAAATAAAC CTACTTTGGT AATTTCGCAT AATAAAACTC TTGTTGGACA GCTTTATGGT
GAATTTAAAG AGTTTTTCCC TAAAAATGCC GTTGATTATT TTGTATCTTA CTATGATTAT
TATCAGCCTG AAGCTTATGT ACCACAGTCG GACACATATA TTGAGAAGGA TTCATCAATC
AATGATGAAA TTGACCAGTT ACGTCATAAA ACTACTAGTG ATTTAATGTC AAGAAATGAT
GTAATTGTTG TTGCGTCAGT GTCTTGTATT TATGGTTTAG GTGATCCTAG AGAATATGCA
GCTAGTGTAG TATCTATCTC TGGAGGTCAA GAAATTAGCC GTGATGTATT ATTGCGGGAT
TTAGTGAATA TTCAATATGA TCGCAATGAT ATTGATTTTC AACGTGGCCG TTTTAGAGTC
CGCGGAGATG TGGTAGAGAT TTTCCCTGCT GGTTATTCTG ATCATGCGTT TAGAGTTGAA
TTTTTTGGCG ATGAAATTGA TCGGATTGTT GAAGTGAATT CCTTAACTGG TGAGGTAATT
GGTGAACGTG AACAAGTTTC TATTTTCCCA GCAACGCACT TTGTTACTAA TGAACAAATT
ATGCAAAGGG CTTTGGCTTC AATTAAAGAT GAAATGAATA TTCAGGTCAA AAAATTTGAA
GGGGAAGGTA AGCTTCTAGA AGCTCAACGA ATTAAGCAAA GAACCACCTA TGATATGGAA
ATGATGAGTG AAGTTGGCTA CACTAACGGA ATCGAAAACT ATTCTAGGCA TATGGAAGGG
CGGAAAGCTG GGCAACCTCC GCATACTTTA CTTGATTTCT TTCCTGATGA TTTTCTAATC
TTAATTGATG AATCACATGC TACCATGCCA GAATTAAAGG CGATGTATAA CGGAGACAGC
GCTCGTAAGC AAACTTTGAT TGATTATGGT TTTAGATTAC CTTCAGCGCT AGATAATCGA
CCACTAAAAT TAGAAGAATT TGAAAAGCAT GTAAATCAGA TAATGTATGT CTCAGCAACT
CCCGGAGACT ATGAATTGAA TCAGACTGAT CATAAAGTGG AACAAATTAT TCGTCCTACT
GGATTGCTTG ATCCAGAGAT TGAAGTTAGA CCAATTAAAG GACAAATTGA CGATTTAGTT
GGTGAGATTA ATAAGCGAAT TGACCGTAAT GAACGTGTTT TTGTGACAAC TTTAACTAAA
AAAATGGCAG AAGATTTGAC CGATTATTTG AAAGATCTTG GAATTAAAGT CCGCTATTTA
CACTCAGATA TCAAGACATT AGAACGTCTA GAGATTATTA GGGACTTAAG ACTTGGCAAA
TTTGACGTTT TAATTGGAAT TAATCTTTTG CGAGAAGGAA TTGATGTGCC GGAAGTGTCT
TTAGTTGCAA TTTTAGATGC AGATAAGGAA GGATTTTTAC GCTCAACTAG ACCTTTAGTT
CAAACGATTG GTCGTGCTGC CAGAAACTCA AATGGTAAGG TGATTATGTA TGCAGACTCA
ATTACGGATT CGATGCGAGA AGCAATTGAT GCTACAGAAA GAAGACGTAG TTTGCAGATG
AAGTTTAACA AGGAACATGG AATTACACCT AAGACTATTG TTAAACCTAT CAGGGATGTC
ATTTCAATTA CTAAAGATAG TGATGAAAAG GAAAATAAAG AGAGTTTTGC TGATCTAAAC
TTTGATGAAT TAACTAAGAA ACAAAAGCAA ACTATGATTA AAACTTTAAC TGCCCAAATG
CAAGAAGCTG CGAAGAAACT AGATTTTGAA GAAGCAGCTA ACTTACGTGA TGCAATTATG
GATTTACAAA AGCAGGTACA TGAAAAGAAA AAGTAG
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| Protein sequence | MIRRQKNKKF ELVSKFQPAG DQEQAIKKLT DGFEQGEKAQ ILEGATGTGK TFTMANVIAK
LNKPTLVISH NKTLVGQLYG EFKEFFPKNA VDYFVSYYDY YQPEAYVPQS DTYIEKDSSI
NDEIDQLRHK TTSDLMSRND VIVVASVSCI YGLGDPREYA ASVVSISGGQ EISRDVLLRD
LVNIQYDRND IDFQRGRFRV RGDVVEIFPA GYSDHAFRVE FFGDEIDRIV EVNSLTGEVI
GEREQVSIFP ATHFVTNEQI MQRALASIKD EMNIQVKKFE GEGKLLEAQR IKQRTTYDME
MMSEVGYTNG IENYSRHMEG RKAGQPPHTL LDFFPDDFLI LIDESHATMP ELKAMYNGDS
ARKQTLIDYG FRLPSALDNR PLKLEEFEKH VNQIMYVSAT PGDYELNQTD HKVEQIIRPT
GLLDPEIEVR PIKGQIDDLV GEINKRIDRN ERVFVTTLTK KMAEDLTDYL KDLGIKVRYL
HSDIKTLERL EIIRDLRLGK FDVLIGINLL REGIDVPEVS LVAILDADKE GFLRSTRPLV
QTIGRAARNS NGKVIMYADS ITDSMREAID ATERRRSLQM KFNKEHGITP KTIVKPIRDV
ISITKDSDEK ENKESFADLN FDELTKKQKQ TMIKTLTAQM QEAAKKLDFE EAANLRDAIM
DLQKQVHEKK K
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