| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1317 |
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| Symbol | |
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| ID | 4439472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1308017 |
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| End bp | 1310878 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673150 |
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| Product | excinuclease ATPase subunit |
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| Protein accession | YP_815117 |
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| Protein GI | 116629945 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.133455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 136 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAATG ATAAAATCGT AATTCATGGA GCGCGTGAAC ATAATTTAAA AGATATAAAT
TTATCGATCC CAAAAGATAA ATTAGTAGTT ATTACCGGCT TATCTGGATC TGGAAAAAGT
TCATTAGCTT TCGATACTTT ATATGCTGAA GGAAGAAGAA GATATGTTGA GTCACTGTCA
AGTTATGCTA GACAGTTTTT AGGTCAAATG GATAAGGCTG ATGTTGATTC AATTGATGGC
TTAAATCCCG CAATTTCTAT TGATCAAAAG ACAACATCTC ATAATCCGCG TTCAACGGTT
GGAACTGTAA CAGAAATTAA TGACTATTTA CGTTTATTGT GGGCACGCGT TGGTCATCCA
ATTTGTCCAA ATGATGGGAC TTTGATTGAG AGGCAAAGCG TGGATCAGAT GGTAGATCGA
GTAATGGATC TACCCGAAAG AAGTAGAATT CAGATTTTAG CTCCGGTTAT TCGTGCTAAA
AGAGGAGAAC ATAAGGAAGT CTTTAAACGA ATCCAACGCG CGGGTTATGT TCGTGTAATT
GTAGACGGTG AAATGCATGA AATTACTGAT GATTTTGACC TAGATAAAAA TAAACGACAC
AGTATTGATA TTGTTGTTGA CCGTTTAATT GTTAAAGAAA ATATTCGAAG CCGTTTATTT
GATTCCGTTG AAGCTGCTCT TCGTTTAGCA GATGGCTACA TGGATGTTGA TGTGATTAAA
GGTAAACGTA TTAATTTTTC AGAATATTAT GCCTGTCCTG TATGTGGTTT TACTGTTGGC
GAAATGGAAC CACGTTTATT TTCGTTTAAT GCGCCTTTTG GAGCTTGTCC TGATTGTGAT
GGATTGGGAA TGAAATTGTC AGTTGATGAA GATTTAGTTA TTCCTGATAA GGATAAAACT
TTGGCAGAGG GAGCTTTAGC ACCATGGTCT AATTCAAAAT ATTATACGGC TATGCTTGAG
CAAGCATGTA AAGCTTTGAA AATACCGATA GACAAGCCAT ACAAAAAATT GACTAAAAGA
CAAAAAGATT TGATTTTAAA TGGATCTAAG GGAAAGAAAA TCAAATTTCA TCTTGAAGGT
GACTTTGGTG TAAATGATAC TGTTCAAGAA TTTGAAGGAA TTTTAAATAA TATCAGTCGC
CGTTATCATC ACCCAATGTC AAAATTTATG CGTGATGTAA TGGGTAAGTA CATGACCGAA
CTTACTTGTT CAACTTGTCA CGGTAAGCGA TTAAATGAAA AGGCATTAGC AGTAAAAGTT
AATGGCAAAG ATATTGCGGA AGATTCAGAT CTGTCAATTT CTAAGTCGCT TAAATTCTTT
AATTCAGTAA AATTAAGCGA GCAAGAAAAA ATGATAGCAA AACCAATTTT GAAAGAAGTA
CGGGATAGAT TGACTTTCTT AAAAAATGTT GGTTTAGATT ATCTAACTTT ATCTCGTTCT
GCTGGAACTT TGTCAGGTGG AGAAGCACAA AGAATTAGAT TAGCCACCCA AATTGGCTCC
AATTTATCTG GCGTTATGTA TATTTTAGAT GAGCCATCAA TTGGTCTTCA TCAACGAGAT
AACGACCGCC TTATTTCTTC TCTTAAAAAG ATGAGGGATC TTGGTAATTC TTTAATTGTA
GTTGAACATG ACGATGAGAC TATGAAACAA GCAGATTACT TAGTTGATAT GGGACCAGGA
GCAGGAGCGT ATGGTGGAAA AGTAATGGCT GCCGGGACGC CTGAAGAAGT GATGAAGAAT
CCTAAATCTT TAACTGGACA ATATTTATCA GGTAAAAAAA TTGTTCCTGT ACCGCTAGAA
AGAAGAAAGG GTAATGGTAA GAAAATTACT GTTACTGGTG CTGCTGAAAA TAATTTGAAG
GACATTTCAG TAGATTTTCC TCTAGGCAAA TTTATCGTGG TGACCGGCGT TTCAGGTTCT
GGAAAATCAA CTCTTGTAAA TTTGATTTTG AAACGTGCTC TAGCGCAAAA ATTGAATAAT
AATTCTGCTA AACCAGGAAA ATACAAGTCT ATTAAAGGAT ATAAAAATAT CGAAAAAATT
ATCGATATTG ATCAAAGCCC TATTGGCCGA ACACCACGTA GTAATCCTGC AACTTATACC
AGTGTATTTG ATGATATTCG AGCTTTATTT GCACAAACTA ATGAAGCAAA AATGCGTGGA
TATACGAAAG CTAGATTTTC TTTTAACGTT AAGGGTGGAA GATGCGAAGC TTGTCACGGC
GATGGGATTA TTAAAATCGA GATGAATTTT TTACCTGATG TTTATGTACC TTGTGAAGTT
TGTCATGGTA CAAGATATAA TTCGGAAACT CTTGAGGTAA CTTATCGTGA AAAAAATATC
TCACAAGTTT TGAATATGAC AATTAATGAA GCTTGCAAAT TCTTTGAAAA TATTCCCAAA
ATTCATCGTA AGCTACAAAC AATCGTTGAT GTTGGTCTGG GTTATGTAAA ACTTGGGCAG
TCAGCTACAA CTTTATCTGG TGGAGAAGCG CAGAGAATGA AATTAGCTTC TGAATTACAA
AAGCTTTCCA CGGGTAATAA TTTTTATATT TTAGATGAAC CAACAACGGG ATTGCATACA
GATGATATTA AACGTTTATT AGAAGTCTTG CAGCGCTTAG TTGATGAAGG AAATACTGTT
TTAATTATTG AACATAATTT AGATGTTATT AAAAATGCCG ACTGGTTAAT TGATTTAGGC
CCTGAAGGTG GAGATGGCGG TGGTCAAGTT GTGGCTACTG GTACTCCAGA AGAAGTTGCT
GAGGTTAAAG AAAGTTATAC AGGACAATAC TTAAAGCCAG TTCTTGAGCG AGATACTAAG
TTAACTAAAA AGCTAATGAA TAGCAAGGGT GATCAGGAAT AA
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| Protein sequence | MVNDKIVIHG AREHNLKDIN LSIPKDKLVV ITGLSGSGKS SLAFDTLYAE GRRRYVESLS
SYARQFLGQM DKADVDSIDG LNPAISIDQK TTSHNPRSTV GTVTEINDYL RLLWARVGHP
ICPNDGTLIE RQSVDQMVDR VMDLPERSRI QILAPVIRAK RGEHKEVFKR IQRAGYVRVI
VDGEMHEITD DFDLDKNKRH SIDIVVDRLI VKENIRSRLF DSVEAALRLA DGYMDVDVIK
GKRINFSEYY ACPVCGFTVG EMEPRLFSFN APFGACPDCD GLGMKLSVDE DLVIPDKDKT
LAEGALAPWS NSKYYTAMLE QACKALKIPI DKPYKKLTKR QKDLILNGSK GKKIKFHLEG
DFGVNDTVQE FEGILNNISR RYHHPMSKFM RDVMGKYMTE LTCSTCHGKR LNEKALAVKV
NGKDIAEDSD LSISKSLKFF NSVKLSEQEK MIAKPILKEV RDRLTFLKNV GLDYLTLSRS
AGTLSGGEAQ RIRLATQIGS NLSGVMYILD EPSIGLHQRD NDRLISSLKK MRDLGNSLIV
VEHDDETMKQ ADYLVDMGPG AGAYGGKVMA AGTPEEVMKN PKSLTGQYLS GKKIVPVPLE
RRKGNGKKIT VTGAAENNLK DISVDFPLGK FIVVTGVSGS GKSTLVNLIL KRALAQKLNN
NSAKPGKYKS IKGYKNIEKI IDIDQSPIGR TPRSNPATYT SVFDDIRALF AQTNEAKMRG
YTKARFSFNV KGGRCEACHG DGIIKIEMNF LPDVYVPCEV CHGTRYNSET LEVTYREKNI
SQVLNMTINE ACKFFENIPK IHRKLQTIVD VGLGYVKLGQ SATTLSGGEA QRMKLASELQ
KLSTGNNFYI LDEPTTGLHT DDIKRLLEVL QRLVDEGNTV LIIEHNLDVI KNADWLIDLG
PEGGDGGGQV VATGTPEEVA EVKESYTGQY LKPVLERDTK LTKKLMNSKG DQE
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