| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1301 |
|---|
| Symbol | |
|---|
| ID | 4439490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1292397 |
|---|
| End bp | 1292966 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639673134 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_815102 |
|---|
| Protein GI | 116629930 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000000681894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 108 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGAA AGGCAAAATT AACTGATTTT CCGTTAGTTT TTCCAATTTT AAAACAAATT
TTTGATGAAA TGGATATGGA TACCATTAAA GCACTCCCAG AAAGTCAATT CTATGATTTG
ATGAAGCATG GTTTCTATTC ACCTCATTAT CGATATTCTC ATAATCGAAT GTGGGTAGAA
ACAGATGAAA TGGATCGTCC AATTGGGTTG ATTGTAATGT ATGGTTATGA TGATCAAGGG
CTAATTGATA TTTCATTAAA AAGTTCCTAT CCTAAAGTTG GATTACCTCT TGATGCGATC
ATCTTTTCAG ATAAAGAAGC ATTACCGCAT GAATGGTATC TTGATGCTAT TGCAGTTTCT
CCAAAACATT GGGGAGAAGG GATCGGACAG CGATTAATTA AATTTGCTCC GGGCGTTGCT
AAGCAGAAGG GATATAAAAA GATAAGTTTG AACGTTGATC AAGATAACCC TAGAGCAGCT
CGTTTGTATG ATTATATGGG TTTTGAAACG ACTTCGACCA TGACTATTGG AGATCGTCTG
TATAATCACA TGGTTAAAAA AGTTAATTAA
|
|---|
| Protein sequence | MIRKAKLTDF PLVFPILKQI FDEMDMDTIK ALPESQFYDL MKHGFYSPHY RYSHNRMWVE
TDEMDRPIGL IVMYGYDDQG LIDISLKSSY PKVGLPLDAI IFSDKEALPH EWYLDAIAVS
PKHWGEGIGQ RLIKFAPGVA KQKGYKKISL NVDQDNPRAA RLYDYMGFET TSTMTIGDRL
YNHMVKKVN
|
|---|
| |