| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1298 |
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| Symbol | |
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| ID | 4439487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1290232 |
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| End bp | 1291092 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639673131 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | YP_815099 |
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| Protein GI | 116629927 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000863241 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 99 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAC TTATTGCAAG CGATATGGAT GGCACACTAT TAAATAAACA AATGCAGATT
TCTTCTGAAA ATATTTCTGC TATTAAAGAA GCACAAGCTA AAGGAATCGA ATTTTTAGTA
GCAACTGGAC GAGCACCTTC TGAATCTCAA GGAATACTGG CTAAAGCTGG ACTTCACACT
GGCTTCATTA ACTTAAATGG CGCAATGGTT TTTAATACAG AAGGTAAACT AATTGTAAAC
GAGCCAATTC CTAAAGAAGA GAGTTTCAAG ATTAATAAGT TACTTAAAGA TTCTGGCTTC
TACTTTGAAA TAGTAGGAGC AGATCATGTT TATTCTGATT CTCGTTTGCG AAGGATCGCT
AATTTTTCTG ATCTTTTAGT TGATCTTAAT AAAAAACTGA CTTTTAAAAA AGCAGTTTCT
TTTGCTGCTG GCTCCGACGA AATAATGAAA ATCAAATACG TCCCTGATTT TAAAGACCTG
CTTAAAAAGC CATCATTTGA AGCAATGAAA TTTGTTGCTT TTCATCCAGA TGGACCCAAA
GTTTTTAATC ATATTCGCCA AGAAATTAAA AAAATCGGCG ATTTAATTGT TACTGCAAGC
TCTTCAACTA ATATTGAAAT AAATAATATT AAGGCTCAAA AAGGAATTGC CTTAATGGAT
TACGCAAAAC TGCAGGGCTA TCAGCCTGAT GAAGTGATGG CTATTGGTGA CAATCTTAAT
GATGAATCAA TGATTCGAAT GGCTGGTATT GGTGTTGCAA TGGAAAACGC CGCACCTGAG
ATCAAAGAAA TCGCTAATTT TATCACTAAA ACTAATAATG AAAATGGCGT TGCGTATGCA
ATTCGTCATT TCTGTAAATA A
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| Protein sequence | MIKLIASDMD GTLLNKQMQI SSENISAIKE AQAKGIEFLV ATGRAPSESQ GILAKAGLHT
GFINLNGAMV FNTEGKLIVN EPIPKEESFK INKLLKDSGF YFEIVGADHV YSDSRLRRIA
NFSDLLVDLN KKLTFKKAVS FAAGSDEIMK IKYVPDFKDL LKKPSFEAMK FVAFHPDGPK
VFNHIRQEIK KIGDLIVTAS SSTNIEINNI KAQKGIALMD YAKLQGYQPD EVMAIGDNLN
DESMIRMAGI GVAMENAAPE IKEIANFITK TNNENGVAYA IRHFCK
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