Gene LGAS_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1293 
SymbolmurB 
ID4439482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1286359 
End bp1287270 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content37% 
IMG OID639673126 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_815094 
Protein GI116629922 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones118 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATGC AACTGATGGA CTTAAAAAAA CAGGGAATTG ATATTCAAGA AAATATTCCA 
TTGAGCCGCT TTACGTTTAC TAAGACCGGT GGACCTGCGC AATATCTTGC TTTTCCTAAA
AATTTAGATG AATTAAAAAT CTTAGTGGAA ACAGTTAAAA CTAATAACCT ACCTTTGACT
GTTATTGGAA ATGCTTCTAA CTTAATTATT AGAGATGGAG GAATTTCAGG TCTAGTTTTA
ATTCTTACTA AGATGGATAA AATTGTTGCA AATCAAGAAG AAGCAACAGT TACTGCGGAT
GCTGGAGCGA GAATTATCGA TACGTCTGAA GCAGCCTGTG AAGCTAGTTT AAGTGGCTTA
GAGTTTGCAG CAGGAATCCC GGGCAGCGTC GGCGGAGCCG TCTTCATGAA TGCTGGTGCT
TATGGCGGCG AGACGGAATT TGTCATTAAA TCTGTTCGAG TCTTAACTCG TGAAGGCAAA
TTTAAAACTT ATACTCACGA TGAAATGGAA TTTGGCTATC GTCATTCACT AGTTCAGGAA
ACTGGAGATA TTGTAATTAG TGCTACTTTT GGTCTTGAAC CAGGAGATAA GTGGGCAATT
AAGGCTAAAA TGGAATACTT CAATGGCTTA CGTAGAGCAA AGCAACCACT TGAATATCCT
TCTTGTGGAA GTGTCTTTAA ACGTCCAACA GGTCATTTTG TAGGCCCAAT GATAATTAAA
GCTGGTCTTC AAGGAAAAAG AATTGGTGGA GCGGAAGATT CAAAGAAGCA TGCTGGCTTT
ATTGTTAATG TTGGTGGTGC TACAGCTACT GATTATTTAG ATTTAATTCA TTTAATTCAA
AAGACGATCA AAAAAGATTT TGATGTTGAT TTGCAGACTG AAGTAAGAAT TATAGGAAAA
GAAAAAGATT AG
 
Protein sequence
MKMQLMDLKK QGIDIQENIP LSRFTFTKTG GPAQYLAFPK NLDELKILVE TVKTNNLPLT 
VIGNASNLII RDGGISGLVL ILTKMDKIVA NQEEATVTAD AGARIIDTSE AACEASLSGL
EFAAGIPGSV GGAVFMNAGA YGGETEFVIK SVRVLTREGK FKTYTHDEME FGYRHSLVQE
TGDIVISATF GLEPGDKWAI KAKMEYFNGL RRAKQPLEYP SCGSVFKRPT GHFVGPMIIK
AGLQGKRIGG AEDSKKHAGF IVNVGGATAT DYLDLIHLIQ KTIKKDFDVD LQTEVRIIGK
EKD