| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1290 |
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| Symbol | |
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| ID | 4439514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1283598 |
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| End bp | 1284395 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 639673123 |
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| Product | spermidine/putrescine ABC transporter permease protein |
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| Protein accession | YP_815091 |
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| Protein GI | 116629919 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0230868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TAAAATGGTC TCGGATTTAT TTTGCTTTTG TCCTTGTTTT GATGTATTTA
CCTATTTTTT ATTTAATATA TTATTCTTTT TCGAGTGGTC ATAATATGGA TCATTTTGAA
AAATTTACTT TGAGTCATTA TCAAGACTTA TTTAACGATA ATCGACTACT AGCAATTTTT
TTAGAAACAA TCTTATTAGC TCTCTTATCT AGTTTGATTG CGACAGTAAT TGGAACTTTT
GGAGCAATTG CAATTAGTCA GACTAAAAAT AAAAAAGGCC AAAAAACATT ATTAGCGTTA
AATAACGTTT TGATGGTTTC ACCAGATGTA ATTATTGGTG CCAGCTTTTT AATCTTTTTT
ACTTTTTTAG GAATTGGTTT GGGCTTTGGT TCAGTATTAT TAAGTCATAT TGCATTTTCG
ATTCCGATTG TTGTCTTAAT GGTTTTGCCG CGTTTAAAGG AGTTTGATTA CTCTTTGGTC
GATGCTGCTA GAGATTTAGG TGCTTCTACT TGGCAAGTTT ATAGTAAAGT AATGATTCCA
GCTATTACAC CAGGAATTCT CGCTGGCTTT TTTATGGCTT TGACTTATTC ATTAGATGAT
TTTGCAGTTA CTTTTTTTGT GACTGGAAAT GGCTTTTCAA CGTTATCTGT AGAAATATAT
TCACGCGCAC GGCAGGGTAT TAATTTAGAA ATTAATGCTT TAAGTACCTT AATGTTTATC
TTCGTAATGG TTTTGGTATT AATTTATTAT GTAATTACTA ATCATAAATC CCATATCGGT
AAGGGGCGTG CACAATGA
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| Protein sequence | MKKIKWSRIY FAFVLVLMYL PIFYLIYYSF SSGHNMDHFE KFTLSHYQDL FNDNRLLAIF
LETILLALLS SLIATVIGTF GAIAISQTKN KKGQKTLLAL NNVLMVSPDV IIGASFLIFF
TFLGIGLGFG SVLLSHIAFS IPIVVLMVLP RLKEFDYSLV DAARDLGAST WQVYSKVMIP
AITPGILAGF FMALTYSLDD FAVTFFVTGN GFSTLSVEIY SRARQGINLE INALSTLMFI
FVMVLVLIYY VITNHKSHIG KGRAQ
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