| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1285 |
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| Symbol | |
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| ID | 4439509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1278325 |
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| End bp | 1279185 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 639673118 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | YP_815086 |
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| Protein GI | 116629914 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000203899 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATAATA GAAAGGAAAG TGAACGATTA CATAGGAGAA AATTGATGAA GACAAAATTA
ATTGCCGTTG ACCTTGATGG AACTTTATTG AATGATAAAC AAGAAATAAG TGTTAAAACA
AGGGAAGCTT TACAAAAAGC ATCTCGATTA GGAATTAAAA TTGTTCCTTG TTCGGGGCGA
CCATTTCCAG GAATTAAAGA GTATTTAGAT CAGTTAGATC TGCAAGATCC TAATCAATAT
GTTGTGGCTT TTAATGGTGC TCTAGTTTTG AATGCACAAG GAAATGCAGT AGTTGAAGAA
TTATTAAGTT ATCAAGATTT CCTTTTTTTT GAAAAAATAG CTCAACAATT GAAGGCTAAC
TTTCATATTG AAGTGAGTGA TAAATTTATT ACATTAGATC ACTTTATTAA TTATTATTTA
TCGCGTGAAA GCTGGCTGAC TAGAATGTCG ATTGAGGTTT GTGGATTTAA AGATATAGCT
AAAGATTTAA AATTTACAAA AGCCATGTTT TCAGGTGCTC CATCAGAAAT GGAAAGAGTT
TATCGGCACC TGCCCAAAGA AGTTATTGAA AAATATAACG TTTCTACCTC TGATAAAACA
TTAATCGAAA TTAATTCTAA GCAAGCTTCA AAAGGAAACG CTTTAAAAGA ATTGGCGCAG
AAACTTAATC TTAGACAAGA TGAAATAATG ATTTTTGGTG ATCAAAAGAA TGATATTTCC
ATGTTTGACG TTCCAGATTT TTATAAAGTA GCTATGGGAA ACGCGGTATT AGAGATAAAG
AAGCGAGCTA ATTATGTTAC TCGAACAAAT AATGAAGATG GAATTGCGTA TGCAATAAGA
AGGTTGATTT TTAATGAATA A
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| Protein sequence | MYNRKESERL HRRKLMKTKL IAVDLDGTLL NDKQEISVKT REALQKASRL GIKIVPCSGR
PFPGIKEYLD QLDLQDPNQY VVAFNGALVL NAQGNAVVEE LLSYQDFLFF EKIAQQLKAN
FHIEVSDKFI TLDHFINYYL SRESWLTRMS IEVCGFKDIA KDLKFTKAMF SGAPSEMERV
YRHLPKEVIE KYNVSTSDKT LIEINSKQAS KGNALKELAQ KLNLRQDEIM IFGDQKNDIS
MFDVPDFYKV AMGNAVLEIK KRANYVTRTN NEDGIAYAIR RLIFNE
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