Gene LGAS_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1260 
Symbol 
ID4439518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1257215 
End bp1258666 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content34% 
IMG OID639673096 
ProductSignal transduction histidine kinase 
Protein accessionYP_815064 
Protein GI116629892 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000444987 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACTAT TCTACCAAGA AATGTTGGGT TTTTTACTAG TAATTATTAC CAGTATTGTA 
ATTATCGGCT CATCCACAAT TCACTTTGCA ACTATTCAGG CATATTCTCA AAGTTATTCA
CGTTTAGAAG GATATGGAAC GTCAATTGGA AAATTAGCTT TAGCTAAAGA TAATCCTAGA
CATGAATTAG ATGCAAAATT TTTAAAGAAT TTACAGGTAG TAATGGAAGG CGAAGATGTA
AATCTTCGCA TTTTTAATAA TAAAAATAGG CAAGTTTATC CTGAAACTAC AATGAACTGG
GCTTTGCCAC AGAAATTATT TAAACAATTG AAGAATGGAA AAACTATTCG AATTAGAAAT
GACCATGAAG ATGGACGTGT GACGTCTTTT TCTAATAAGG ATCCTTATAC CAGTGTAATT
GTTCCTTGGC GTAGCAATGG AAAATTGGTT GGAGTTATTT GGATTGGTTC GCGCGTCCAG
AATGTTGAAC AGATGATTGT ACGTGAAAAA CATAATCTGA TTACAGCATT GCTTAGTTCT
CTAGTAATTG GTGGCCTAAT TAGCTTTATT TTGTCATATT ATATTTCTAG AAAAATCAAA
CTTTTATCAA GTGCTACTAA AAAGGTCGCT CAAGGTGACT TTAATGTACA TTTGAAACAC
AAAGATACTG ACGAAATTGA TGACTTGGCA CGTAATTTTA ATATTATGGT CAACGCATTA
AAAGAGTCAA ATGACGAAAT CAAGGCACAA GAGAAGCGAC GAGAGCAATT TATGGCTGAC
GCTGCCCATG AAATGAGAAC GCCTTTAACT ACGATTAATG GGCTACTAGA GGGTTTTGAA
TATGATGCTA TTCCTGAAGA GGCAAAGCCA AAATCAATTG CTTTGATGCA TAGTGAAACT
AAACGATTAA TTAGGTTAGT AAATGAAAAC TTAGACTACG AAAAAATTAG AAATAATAAA
ATTAGTCTAA TTCAATCTCG ATTCAATGCT ACCGAGGTCT TAACGAATTT GTTAACTCAG
ATGAAGCAAA AAGCCATTCA AAAAAATGAC AAATTGATTC TTGATTGTCC ATCTGAAGTT
GAAGTTTATG CAGATAAAGA TAGATTTACG CAAATAATGG TAAATTTAGT TCAAAATGCT
TTGCAATTTA CTGAAAACGG AAAAATTAAA ATTTCCGCTT GGAGAATTAA GCATGGAGCC
CAGTTCGAGA TCGCAGATAC TGGAATTGGC ATGAGTCAAA AGCAGATGAA GTATATTTTT
GAGCGATTTT ATAAGGCTGA TCCTTCCAGG GCTAAAATTG GGTCTGGAGA ATCAGGATTA
GGACTCTCTA TTGTTTTGTC GCTTATTAAG CAACATGGCG GTAAGATCGA TGTTGATTCA
GAACCCGGCA AGGGAGCAAA ATTTACGGTA ACTTTGTATG ATAAGGGCTA TAAAGAATTT
ATTAAAGATT AA
 
Protein sequence
MKLFYQEMLG FLLVIITSIV IIGSSTIHFA TIQAYSQSYS RLEGYGTSIG KLALAKDNPR 
HELDAKFLKN LQVVMEGEDV NLRIFNNKNR QVYPETTMNW ALPQKLFKQL KNGKTIRIRN
DHEDGRVTSF SNKDPYTSVI VPWRSNGKLV GVIWIGSRVQ NVEQMIVREK HNLITALLSS
LVIGGLISFI LSYYISRKIK LLSSATKKVA QGDFNVHLKH KDTDEIDDLA RNFNIMVNAL
KESNDEIKAQ EKRREQFMAD AAHEMRTPLT TINGLLEGFE YDAIPEEAKP KSIALMHSET
KRLIRLVNEN LDYEKIRNNK ISLIQSRFNA TEVLTNLLTQ MKQKAIQKND KLILDCPSEV
EVYADKDRFT QIMVNLVQNA LQFTENGKIK ISAWRIKHGA QFEIADTGIG MSQKQMKYIF
ERFYKADPSR AKIGSGESGL GLSIVLSLIK QHGGKIDVDS EPGKGAKFTV TLYDKGYKEF
IKD