Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1260 |
Symbol | |
ID | 4439518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1257215 |
End bp | 1258666 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673096 |
Product | Signal transduction histidine kinase |
Protein accession | YP_815064 |
Protein GI | 116629892 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000444987 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACTAT TCTACCAAGA AATGTTGGGT TTTTTACTAG TAATTATTAC CAGTATTGTA ATTATCGGCT CATCCACAAT TCACTTTGCA ACTATTCAGG CATATTCTCA AAGTTATTCA CGTTTAGAAG GATATGGAAC GTCAATTGGA AAATTAGCTT TAGCTAAAGA TAATCCTAGA CATGAATTAG ATGCAAAATT TTTAAAGAAT TTACAGGTAG TAATGGAAGG CGAAGATGTA AATCTTCGCA TTTTTAATAA TAAAAATAGG CAAGTTTATC CTGAAACTAC AATGAACTGG GCTTTGCCAC AGAAATTATT TAAACAATTG AAGAATGGAA AAACTATTCG AATTAGAAAT GACCATGAAG ATGGACGTGT GACGTCTTTT TCTAATAAGG ATCCTTATAC CAGTGTAATT GTTCCTTGGC GTAGCAATGG AAAATTGGTT GGAGTTATTT GGATTGGTTC GCGCGTCCAG AATGTTGAAC AGATGATTGT ACGTGAAAAA CATAATCTGA TTACAGCATT GCTTAGTTCT CTAGTAATTG GTGGCCTAAT TAGCTTTATT TTGTCATATT ATATTTCTAG AAAAATCAAA CTTTTATCAA GTGCTACTAA AAAGGTCGCT CAAGGTGACT TTAATGTACA TTTGAAACAC AAAGATACTG ACGAAATTGA TGACTTGGCA CGTAATTTTA ATATTATGGT CAACGCATTA AAAGAGTCAA ATGACGAAAT CAAGGCACAA GAGAAGCGAC GAGAGCAATT TATGGCTGAC GCTGCCCATG AAATGAGAAC GCCTTTAACT ACGATTAATG GGCTACTAGA GGGTTTTGAA TATGATGCTA TTCCTGAAGA GGCAAAGCCA AAATCAATTG CTTTGATGCA TAGTGAAACT AAACGATTAA TTAGGTTAGT AAATGAAAAC TTAGACTACG AAAAAATTAG AAATAATAAA ATTAGTCTAA TTCAATCTCG ATTCAATGCT ACCGAGGTCT TAACGAATTT GTTAACTCAG ATGAAGCAAA AAGCCATTCA AAAAAATGAC AAATTGATTC TTGATTGTCC ATCTGAAGTT GAAGTTTATG CAGATAAAGA TAGATTTACG CAAATAATGG TAAATTTAGT TCAAAATGCT TTGCAATTTA CTGAAAACGG AAAAATTAAA ATTTCCGCTT GGAGAATTAA GCATGGAGCC CAGTTCGAGA TCGCAGATAC TGGAATTGGC ATGAGTCAAA AGCAGATGAA GTATATTTTT GAGCGATTTT ATAAGGCTGA TCCTTCCAGG GCTAAAATTG GGTCTGGAGA ATCAGGATTA GGACTCTCTA TTGTTTTGTC GCTTATTAAG CAACATGGCG GTAAGATCGA TGTTGATTCA GAACCCGGCA AGGGAGCAAA ATTTACGGTA ACTTTGTATG ATAAGGGCTA TAAAGAATTT ATTAAAGATT AA
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Protein sequence | MKLFYQEMLG FLLVIITSIV IIGSSTIHFA TIQAYSQSYS RLEGYGTSIG KLALAKDNPR HELDAKFLKN LQVVMEGEDV NLRIFNNKNR QVYPETTMNW ALPQKLFKQL KNGKTIRIRN DHEDGRVTSF SNKDPYTSVI VPWRSNGKLV GVIWIGSRVQ NVEQMIVREK HNLITALLSS LVIGGLISFI LSYYISRKIK LLSSATKKVA QGDFNVHLKH KDTDEIDDLA RNFNIMVNAL KESNDEIKAQ EKRREQFMAD AAHEMRTPLT TINGLLEGFE YDAIPEEAKP KSIALMHSET KRLIRLVNEN LDYEKIRNNK ISLIQSRFNA TEVLTNLLTQ MKQKAIQKND KLILDCPSEV EVYADKDRFT QIMVNLVQNA LQFTENGKIK ISAWRIKHGA QFEIADTGIG MSQKQMKYIF ERFYKADPSR AKIGSGESGL GLSIVLSLIK QHGGKIDVDS EPGKGAKFTV TLYDKGYKEF IKD
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