Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1256 |
Symbol | pgi |
ID | 4439546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1252711 |
End bp | 1254054 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673092 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_815060 |
Protein GI | 116629888 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000664093 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAAAG TTGTTCACTT TGATGCAAGT AAATTAACTC CGTTTGTTCA TGAAAATGAA TTAAAGGAAA TGCAAGCAAT GGTAACTGCT GCAGATCAAG AATTACGCGA AGGTACTGGC GCAGGTAGTG ACTTCCGTGG TTGGATTGAT TTACCAATTA ATTACGATAA AGACGAATTT GACCGTATTA AAAAAGCAGC TAAGAAGATT CAAAATGATT CTGAAGTTTT AGTTGGTATT GGTATCGGTG GTTCTTACCT TGGTGCCCAA GCTTCAATTG AATTTTTAAA CAGTTCTTTT TATGGTAGAG AAAAAGAAAA GTACCCAACT GTTGTATTTT GTGGTAACTC TCTTTCAGGT TCATACCTCT ATGACTTACT TGAATGGTTA GGAGATAAGG ACTTTTCAAT TAATATTATT TCTAAGTCTG GTACTACTAC TGAACCTTCA ATTGCTTTCC GTGTCTTGAA GGATAAGTTA ATCAAGAAGT ATGGTAAAGA AGAAGCTGCT AAGAGAATTT ATGCAACTAC TGACCGCGCT AAGGGTGCAT TAAAGACTGA AGCTGATGCA GAAGGTTACG AAGAATTCGT AGTTCCAGAT GATATTGGTG GTCGTTTCTC AGTATTATCA GCTGTTGGTT TGCTCCCAAT TGCTGTAGCT GGTGGAGATA TTGATGCAAT GATGAAGGGT GCTGCAGATG CACGTGCTGC ATACACTGAT CCAGATGTAT CAAAGGATAA TCCATATCAA TATGCTGCTC TTCGTAACAT TCTTTATCGT AAGGGCTATA CTACTGAATT ACTTGAAAAC TATGAACCAT CATTAAGAAT GTTTGGTGAA TGGTGGAAGC AATTAATGGG TGAATCTGAA GGTAAAGATC AAAAGGGTAT TTACCCATCT AGTGCTAACT TCACCACTGA TCTTCACTCA CTTGGTCAAT ACATCCAAGA AGGTCGTCGT AATTTAATGG AAACTGTTAT TCGTGTTGAA AGTCCAGAAC ATGATGTTAC TATTCCAGAC GATAAAGAAA ACTTAGATCA ATTAAACTTC TTATCAGGTA AGACGATGAA CTACGTAAAC GATCGTGCAT ATGAAGGTGT AGTTTTAGCT CATACTGATG GTGGAGTACC AGTTATGACT GTTGATATTG AAAATCAATC AGCTCACACT TTAGGTTACT TAATTTACTG GTTCGAATTA GCTGTAGGTA TTTCAGGTTA CTTGAACGGT ATTAACCCAT TTAACCAACC AGGTGTTGAA AGTTACAAGA GAAACATGTT TGGTCTTTTG AACAAGCCTG GTTATGAAGA CTTACATGAT GATTTGACTA AACGTTTAAA ATAA
|
Protein sequence | MSKVVHFDAS KLTPFVHENE LKEMQAMVTA ADQELREGTG AGSDFRGWID LPINYDKDEF DRIKKAAKKI QNDSEVLVGI GIGGSYLGAQ ASIEFLNSSF YGREKEKYPT VVFCGNSLSG SYLYDLLEWL GDKDFSINII SKSGTTTEPS IAFRVLKDKL IKKYGKEEAA KRIYATTDRA KGALKTEADA EGYEEFVVPD DIGGRFSVLS AVGLLPIAVA GGDIDAMMKG AADARAAYTD PDVSKDNPYQ YAALRNILYR KGYTTELLEN YEPSLRMFGE WWKQLMGESE GKDQKGIYPS SANFTTDLHS LGQYIQEGRR NLMETVIRVE SPEHDVTIPD DKENLDQLNF LSGKTMNYVN DRAYEGVVLA HTDGGVPVMT VDIENQSAHT LGYLIYWFEL AVGISGYLNG INPFNQPGVE SYKRNMFGLL NKPGYEDLHD DLTKRLK
|
| |