Gene LGAS_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1249 
Symbol 
ID4439539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1247232 
End bp1247831 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content37% 
IMG OID639673086 
Productthymidine kinase 
Protein accessionYP_815056 
Protein GI116629884 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAAT TGTTTTTTCG CTATGGTGCA ATGAGTAGTG GTAAGTCAAT TGAAATACTA 
AAGGTTGCCC ATAATTATGA GGCACAAGGT CGAAAAATTG CCTTAATGAC GAGTAGTGTA
GATGATAGGA GTGGTGTGGG GACAGTTGCT TCTAGAATTG GCCTTCACCG TAAGGCTGAG
CCGATTAGTG AAGATTTGAA TTTGTTTAAC TACGTTTCAG AAATGAATAA GAATGATGTT
GAGTCTGGTA ATGGGACTGT GGCTTGTGTT TTAATTGACG AGGCACAGTT TTTAAAGAAA
CATCATGTTT TAGAATGTGC AAGGATTGTT GACGAATTAA AGATTCCTGT GATGGCATTT
GGCCTAAAGA ATGATTTTCA GAATCATTTA TTCGAAGGTA GTGAAAACTT ATTGATTTTT
GCTGATAAAA TAGAAGAAAT GAAGACCATT TGTCACTACT GCGGTCATAA GGCTACAATG
AATTTGCGAA TTAATTCTGG AAAACCTGTT TATGAGGGTG AACAAGTTCA AATTGGCGGA
GATGAGTCTT ATTATCCCGT GTGTCGTTTT CACTATTTTC ATCCCGATAA ACAAAGATAA
 
Protein sequence
MAQLFFRYGA MSSGKSIEIL KVAHNYEAQG RKIALMTSSV DDRSGVGTVA SRIGLHRKAE 
PISEDLNLFN YVSEMNKNDV ESGNGTVACV LIDEAQFLKK HHVLECARIV DELKIPVMAF
GLKNDFQNHL FEGSENLLIF ADKIEEMKTI CHYCGHKATM NLRINSGKPV YEGEQVQIGG
DESYYPVCRF HYFHPDKQR