Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1249 |
Symbol | |
ID | 4439539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1247232 |
End bp | 1247831 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673086 |
Product | thymidine kinase |
Protein accession | YP_815056 |
Protein GI | 116629884 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1435] Thymidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCAAT TGTTTTTTCG CTATGGTGCA ATGAGTAGTG GTAAGTCAAT TGAAATACTA AAGGTTGCCC ATAATTATGA GGCACAAGGT CGAAAAATTG CCTTAATGAC GAGTAGTGTA GATGATAGGA GTGGTGTGGG GACAGTTGCT TCTAGAATTG GCCTTCACCG TAAGGCTGAG CCGATTAGTG AAGATTTGAA TTTGTTTAAC TACGTTTCAG AAATGAATAA GAATGATGTT GAGTCTGGTA ATGGGACTGT GGCTTGTGTT TTAATTGACG AGGCACAGTT TTTAAAGAAA CATCATGTTT TAGAATGTGC AAGGATTGTT GACGAATTAA AGATTCCTGT GATGGCATTT GGCCTAAAGA ATGATTTTCA GAATCATTTA TTCGAAGGTA GTGAAAACTT ATTGATTTTT GCTGATAAAA TAGAAGAAAT GAAGACCATT TGTCACTACT GCGGTCATAA GGCTACAATG AATTTGCGAA TTAATTCTGG AAAACCTGTT TATGAGGGTG AACAAGTTCA AATTGGCGGA GATGAGTCTT ATTATCCCGT GTGTCGTTTT CACTATTTTC ATCCCGATAA ACAAAGATAA
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Protein sequence | MAQLFFRYGA MSSGKSIEIL KVAHNYEAQG RKIALMTSSV DDRSGVGTVA SRIGLHRKAE PISEDLNLFN YVSEMNKNDV ESGNGTVACV LIDEAQFLKK HHVLECARIV DELKIPVMAF GLKNDFQNHL FEGSENLLIF ADKIEEMKTI CHYCGHKATM NLRINSGKPV YEGEQVQIGG DESYYPVCRF HYFHPDKQR
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