| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1245 |
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| Symbol | upp |
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| ID | 4439535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1243554 |
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| End bp | 1244183 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639673082 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_815052 |
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| Protein GI | 116629880 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000033391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTAAGT TTACCGTTTT GAATCACCCG TTGATCCAAC ATAAGTTGAC AATCATCCGT
AAGAAAGATA CAGGTACGAA CGAATTTCGT CAAATTGTTG GTGAAATTGG TGGACTCATG
GTGTATGAAA TGACACGTGA TTTGCCATTG AAGAATGTTG AGATTGAAAC TCCAATTGGA
AAGTCAACTC AAAAAGAATT AGCAGGTAAA AAATTGGTTA TTGTGCCAAT TCTGCGTGCT
GGTCTTGGAA TGGTCGATGG TGTTCTTCAA ATGATCCCAT CTGCTAAAGT CGGACATATT
GGCATGTATC GTGATGAAGA GACTTTAAAG CCACATGAAT ATTTCTTCAA GATGCCACCA
GATATTGAAG AACGTGAATG TATTATTGTT GATCCAATGC TTGCTACCGG TGGATCAGCA
AACATGGCTA TTGGAGCATT AAAGAAGCGT GGTGCTAAAA ACATTCGCTT AGCTGTTTTA
GTTGCAGCTC CTGAAGGTGT AAAGGCTGTT CAAGAAGCAA ATCCTGATGT TGATATCTAT
GCAGCAGAAG AAGATGAAAA ATTAATGGAT AACGGTTACA TCTACCCAGG TCTAGGGGAT
GCAGGAGATA GATTGTTCGG AACTAAGTAA
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| Protein sequence | MGKFTVLNHP LIQHKLTIIR KKDTGTNEFR QIVGEIGGLM VYEMTRDLPL KNVEIETPIG
KSTQKELAGK KLVIVPILRA GLGMVDGVLQ MIPSAKVGHI GMYRDEETLK PHEYFFKMPP
DIEERECIIV DPMLATGGSA NMAIGALKKR GAKNIRLAVL VAAPEGVKAV QEANPDVDIY
AAEEDEKLMD NGYIYPGLGD AGDRLFGTK
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