Gene LGAS_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1231 
Symbol 
ID4439554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1233144 
End bp1233632 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content36% 
IMG OID639673068 
Productuniversal stress protein UspA-like nucleotide-binding protein 
Protein accessionYP_815038 
Protein GI116629866 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0928925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAACA TGTTAAAACA ATATCAACAT ATCCAAGTTG CCGTAGATGG TTCTAAAGAA 
GCTGACGTTG CATTTAGCAA AGCTGTTGAA GTAGCAAAAA GAAATGGTGC TACTCTTGAA
ATTCTTCACG TAGTAGATAC TCGTGCCTTT CAAGATGTTT CCAGCTTTGA TTCTGCAATG
GTTGAACAAG TATCTGAAGA GGCAAAAACT AAAATCGAAG AATATTATAA CCGTGCAAAG
GATGCCGGTG TTAAAAATGT TCATTACTCA ATCGAATTTG GTTCTCCAAA GAACATCATT
GCTCATGAAT TTCCTGAAGA ACATAATATT GATTTAATTA TTCTAGGTGC CACTGGTTTA
AACGCTGTTG AAAGACTTTT AATTGGTAGT ATTACAGAAT ACGTTACTCG GACTGCAGCT
TGCGATGTTC TAGTAATCCG TCAACCGGCC GCACAAAATG AAGATATTAA GAAAAATCAA
GAAAACTAA
 
Protein sequence
MINMLKQYQH IQVAVDGSKE ADVAFSKAVE VAKRNGATLE ILHVVDTRAF QDVSSFDSAM 
VEQVSEEAKT KIEEYYNRAK DAGVKNVHYS IEFGSPKNII AHEFPEEHNI DLIILGATGL
NAVERLLIGS ITEYVTRTAA CDVLVIRQPA AQNEDIKKNQ EN