Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1231 |
Symbol | |
ID | 4439554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1233144 |
End bp | 1233632 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639673068 |
Product | universal stress protein UspA-like nucleotide-binding protein |
Protein accession | YP_815038 |
Protein GI | 116629866 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0928925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCAACA TGTTAAAACA ATATCAACAT ATCCAAGTTG CCGTAGATGG TTCTAAAGAA GCTGACGTTG CATTTAGCAA AGCTGTTGAA GTAGCAAAAA GAAATGGTGC TACTCTTGAA ATTCTTCACG TAGTAGATAC TCGTGCCTTT CAAGATGTTT CCAGCTTTGA TTCTGCAATG GTTGAACAAG TATCTGAAGA GGCAAAAACT AAAATCGAAG AATATTATAA CCGTGCAAAG GATGCCGGTG TTAAAAATGT TCATTACTCA ATCGAATTTG GTTCTCCAAA GAACATCATT GCTCATGAAT TTCCTGAAGA ACATAATATT GATTTAATTA TTCTAGGTGC CACTGGTTTA AACGCTGTTG AAAGACTTTT AATTGGTAGT ATTACAGAAT ACGTTACTCG GACTGCAGCT TGCGATGTTC TAGTAATCCG TCAACCGGCC GCACAAAATG AAGATATTAA GAAAAATCAA GAAAACTAA
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Protein sequence | MINMLKQYQH IQVAVDGSKE ADVAFSKAVE VAKRNGATLE ILHVVDTRAF QDVSSFDSAM VEQVSEEAKT KIEEYYNRAK DAGVKNVHYS IEFGSPKNII AHEFPEEHNI DLIILGATGL NAVERLLIGS ITEYVTRTAA CDVLVIRQPA AQNEDIKKNQ EN
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