Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1227 |
Symbol | |
ID | 4439550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1230578 |
End bp | 1231225 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639673064 |
Product | hypothetical protein |
Protein accession | YP_815034 |
Protein GI | 116629862 |
COG category | [S] Function unknown |
COG ID | [COG5506] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAAAT GGAACCAGAA GTTGATGAAG CTCTTATCGT TGAATGGTAC AACAAGAAGC TTTAATATTT ACTGCTTCAT TACAAAAAGT CTTTCCAATT GTGGGAAGAC TTTTTTGTTT TCTCCTCTTC TACTTTGCTA CACTAAGAAT AAAGCTTTTA ACCAGAAAAA GGAAAACAAA ATTATGACTA AAGATTTAAA TACACGACTA GAAAATGCTG CTAAGGGGAT TACTCCTCAA ACTCGTCCAG ATGAGCGAAG AAGATATTTA GGCTCTTTAC GAGAACGAGT TTTAGTACGA ATGACTGTAG AAGAAACAAA TAACCAAGCA TTAGATACCC TATTTTTAAA ACACATTAAT GATTTCAAGG GTTATACCAT TTTAATCAAT GGGAAAATGC CTCAAAACAA TTTTATTAAC AAACTAATGG GTTTATGTTC ACAGCAAGAT ATAAAATTCA CCTTAATAAA TGATGATACA GCAAAAGATG AGCCAAACGC TACTGGTGTT TTAGTAGTTT CAAAAACCGC TATTAATCAT TACCGGATCG AGATTAATCA AGTTTATGCT CCAGAAGCTC CTCATGAACA ACTTTCTGAG CCGAAAAAAG AAAGTTTCTG GAATAGATTA TTTAGAAAAA AGGATTAA
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Protein sequence | MTKWNQKLMK LLSLNGTTRS FNIYCFITKS LSNCGKTFLF SPLLLCYTKN KAFNQKKENK IMTKDLNTRL ENAAKGITPQ TRPDERRRYL GSLRERVLVR MTVEETNNQA LDTLFLKHIN DFKGYTILIN GKMPQNNFIN KLMGLCSQQD IKFTLINDDT AKDEPNATGV LVVSKTAINH YRIEINQVYA PEAPHEQLSE PKKESFWNRL FRKKD
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