Gene LGAS_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1227 
Symbol 
ID4439550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1230578 
End bp1231225 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content33% 
IMG OID639673064 
Producthypothetical protein 
Protein accessionYP_815034 
Protein GI116629862 
COG category[S] Function unknown 
COG ID[COG5506] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAAT GGAACCAGAA GTTGATGAAG CTCTTATCGT TGAATGGTAC AACAAGAAGC 
TTTAATATTT ACTGCTTCAT TACAAAAAGT CTTTCCAATT GTGGGAAGAC TTTTTTGTTT
TCTCCTCTTC TACTTTGCTA CACTAAGAAT AAAGCTTTTA ACCAGAAAAA GGAAAACAAA
ATTATGACTA AAGATTTAAA TACACGACTA GAAAATGCTG CTAAGGGGAT TACTCCTCAA
ACTCGTCCAG ATGAGCGAAG AAGATATTTA GGCTCTTTAC GAGAACGAGT TTTAGTACGA
ATGACTGTAG AAGAAACAAA TAACCAAGCA TTAGATACCC TATTTTTAAA ACACATTAAT
GATTTCAAGG GTTATACCAT TTTAATCAAT GGGAAAATGC CTCAAAACAA TTTTATTAAC
AAACTAATGG GTTTATGTTC ACAGCAAGAT ATAAAATTCA CCTTAATAAA TGATGATACA
GCAAAAGATG AGCCAAACGC TACTGGTGTT TTAGTAGTTT CAAAAACCGC TATTAATCAT
TACCGGATCG AGATTAATCA AGTTTATGCT CCAGAAGCTC CTCATGAACA ACTTTCTGAG
CCGAAAAAAG AAAGTTTCTG GAATAGATTA TTTAGAAAAA AGGATTAA
 
Protein sequence
MTKWNQKLMK LLSLNGTTRS FNIYCFITKS LSNCGKTFLF SPLLLCYTKN KAFNQKKENK 
IMTKDLNTRL ENAAKGITPQ TRPDERRRYL GSLRERVLVR MTVEETNNQA LDTLFLKHIN
DFKGYTILIN GKMPQNNFIN KLMGLCSQQD IKFTLINDDT AKDEPNATGV LVVSKTAINH
YRIEINQVYA PEAPHEQLSE PKKESFWNRL FRKKD