| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1219 |
|---|
| Symbol | valS |
|---|
| ID | 4439577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1217912 |
|---|
| End bp | 1220551 |
|---|
| Gene Length | 2640 bp |
|---|
| Protein Length | 879 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639673056 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_815026 |
|---|
| Protein GI | 116629854 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 105 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATT TAGCACCTAA ATATAATCCT AATGAGGTTG AAAAAGGTAG ATATCAAGAA
TGGCTTGATG AGGATCTTTT TAAGCCATCT GGCGATAAAA AGGCTCACCC TTATTCAATT
GTTATTCCAC CACCAAATGT AACTGGAAAA TTACACTTAG GACACGCTTG GGATACCGCA
ATTCAAGATA CATTAATTCG TTTTAAGCGA ATGGAAGGGT ATGATACTCT TTACCTTCCA
GGTATGGATC ATGCTGGTAT TGCTACTCAA GCTAAAGTGG AAGCAAAGTT GCGTAAACAA
GGTAAAGACC GTCACCAAAT GGGACGTGAA GCGTTTGTTA AGCAAGTTTG GGACTGGAAA
GATGAATATG CAAACATCAT CAAAGGTCAA TGGGCTAAGA TGGGATTATC TCTTGATTAC
TCAAGAGAAC GATTTACTTT AGATAAAGGA CTTTCAAAAG CCGTTAGAAA AGTTTTCGTT
CAATTATATA ACGAAGGACT AATTTATCGC GGTGAATATA TTATTAACTG GGATCCAGAA
TTACAAACTG CTCTTAGTGA TATTGAAGTT ATTCACAAAG ATGACAAGGG TGCATTTTAC
CATATAAAAT ATCCATTTGT AGATGGATCT GGTTTTGTTG AAATTGCAAC TACTCGTCCT
GAAACTATGT TTGGTGATAC GGCTGTGGCT GTTGCACCAG GGGATGAACG TTATAAAGAT
ATCGTAGGTA AAGAATTAGT TCTACCACTT GTTGGTCGTC ATATTCCAAT TATTGAAGAC
CAACACGTAG ATCCAGAATT TGGTACTGGT TTAGTTAAGA TTACGCCAGC TCATGATCCT
AACGACTTCC AAGTAGGTAA CCGTCATAAT CTTGAAAGAA TTAATGTAAT GAATGATGAC
GGAACTATGA ACGAAGAGGC TGGTAAGTAT GCTGGTATGG ATCGTTTTGA AGCTCGTGAA
GCTTTAGTAA AGGACTTAAA GAAAGAAGGT TACTTAATTA AAGTTGAACC AATTGTCCAC
TCAGTTGGTC ACTCGGAGCG TTCAGGCGTT CAAGTAGAAC CTAGACTTTC AAAGCAATGG
TTCGTAAAAA TGAAGCCACT TGCTGAAGAA GTTCTTAAGA ATCAAAAGAC TGATGGTAAA
GTTAACTTTG TCCCAGAGCG ATTTGAAGGC ACTTTGAATC ACTGGATGGA AGATGTTCAT
GACTGGGTGA TTTCTCGTCA ATTATGGTGG GGTCACCGAA TTCCAGCTTG GTACAACAAG
AAGACTGGTG AAACTTATGT TGGCGAAGAA GCACCTAAGG ATATTGAAAA TTGGGAACAA
GATCCAGATG TTTTAGATAC TTGGTTCTCA AGCGCTCTTT GGCCATTTTC AACATTGGGC
TGGCCAGATA CTGATAATCC AGATTTTAAG CGCTACTTCC CAACTAATAC TTTAGTTACC
GGATATGACA TTATTTTCTT CTGGGTATCA AGAATGATCT TCCAAGGTCT TCACTTTACT
AAGAAGCGTC CATTTAAAGA TGTTGTTTTG CATGGTTTAA TGCGAGACGA ACAAGGACGT
AAGATGAGTA AGTCACTCGG TAATGGTGTC GATCCAATGG ATGTTGTAGA TAAGTATGGT
GCCGATGCTC TACGCTGGTT CTTATTAAAC GGTACTGCTC CTGGTCAAGA TACGCGTTAT
GATCCAAAGA AGTTAGCTGC TGCTTGGAAC TTTATCAATA AGATTTGGAA TGCAAGCCGT
TTTGTAATTA TGAACTTGCC AGAAGATGCA AAACCTGCTC ATATGCCAGA CACTACGAAG
TTTGATTTAG CAGATAGTTG GATTTTTGAT AGATTAAATC ATACTGTATC AGAAGTCACC
CGTTTATTTG ATGAATACAA GTTTGGAGAA GCTGGGCGTG AACTTTATAA CTTTATTTGG
AATGATTTCT GTGACTGGTA CATTGAAATT TCTAAAGTTG CTTTAAATGG CGATGACGAA
GAATTAAAAG CTAGAAAGCA AGAAAACTTG ATTTGGATTC TTGATCAAAT CTTACGTTTA
ATGCACCCAA TTATGCCATT TGTTACTGAA AAGTTATGGC TTTCAATGCC TCATGAAGGC
AAGTCAATTA TGACTGCTAA ATATCCAGAA ACTCATGCAG AGTTTGAAAA CAAGCAAGCA
GACAGCGATA TGGCATTCTT GATTGAAGTT ATCAAGGCTG TACGTAATAT TCGTATGGAA
GTTAATGCTC CAATGTCTTC ACAAATTGAC ATCATGATTC AATTGGATGA TGAAGCAAAT
AAACATATTT TGGATGATAA CGCTGAATAT GTAGAAAACT TTTTACACCC TAAAGATTTA
CAAGTTGCGG CAGATATTGA AGCACCAAAA CTTGCAAAAA CTGCCGTAAT TCCAGGAGCT
CAGATTTTTG TACCGTTAAC TGAATTAGTT AATGTTGACG ATGAACTTAA GAAGATGGAA
AAAGAAGAAA AACGTCTTGA AGAGGAAGTA CAAAGAGCTG AAAAGAAACT CGCAAATCAA
GGCTTTGTAG CTCATGCTCC TGAAGCAGTT GTAAATAAAG AAAAGGAAAA GAAAGCTGAC
TATGAAAGTC AACTTGCTGG TGTTCGTGAA CGTATGAAAG AATTAAAGGA AAGTAAATAG
|
|---|
| Protein sequence | MTDLAPKYNP NEVEKGRYQE WLDEDLFKPS GDKKAHPYSI VIPPPNVTGK LHLGHAWDTA
IQDTLIRFKR MEGYDTLYLP GMDHAGIATQ AKVEAKLRKQ GKDRHQMGRE AFVKQVWDWK
DEYANIIKGQ WAKMGLSLDY SRERFTLDKG LSKAVRKVFV QLYNEGLIYR GEYIINWDPE
LQTALSDIEV IHKDDKGAFY HIKYPFVDGS GFVEIATTRP ETMFGDTAVA VAPGDERYKD
IVGKELVLPL VGRHIPIIED QHVDPEFGTG LVKITPAHDP NDFQVGNRHN LERINVMNDD
GTMNEEAGKY AGMDRFEARE ALVKDLKKEG YLIKVEPIVH SVGHSERSGV QVEPRLSKQW
FVKMKPLAEE VLKNQKTDGK VNFVPERFEG TLNHWMEDVH DWVISRQLWW GHRIPAWYNK
KTGETYVGEE APKDIENWEQ DPDVLDTWFS SALWPFSTLG WPDTDNPDFK RYFPTNTLVT
GYDIIFFWVS RMIFQGLHFT KKRPFKDVVL HGLMRDEQGR KMSKSLGNGV DPMDVVDKYG
ADALRWFLLN GTAPGQDTRY DPKKLAAAWN FINKIWNASR FVIMNLPEDA KPAHMPDTTK
FDLADSWIFD RLNHTVSEVT RLFDEYKFGE AGRELYNFIW NDFCDWYIEI SKVALNGDDE
ELKARKQENL IWILDQILRL MHPIMPFVTE KLWLSMPHEG KSIMTAKYPE THAEFENKQA
DSDMAFLIEV IKAVRNIRME VNAPMSSQID IMIQLDDEAN KHILDDNAEY VENFLHPKDL
QVAADIEAPK LAKTAVIPGA QIFVPLTELV NVDDELKKME KEEKRLEEEV QRAEKKLANQ
GFVAHAPEAV VNKEKEKKAD YESQLAGVRE RMKELKESK
|
|---|
| |