| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1187 |
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| Symbol | |
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| ID | 4439615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1189428 |
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| End bp | 1190072 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639673024 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_814994 |
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| Protein GI | 116629822 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0292509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAA AAATAGCCAA CTTATATGAT GCTGGCAAAG TTGATAATGC TATACACTTA
TTGATTAAAA AAATAAACAA TCATCCTAAA AATATAGAAA ATTATTTACA GCTTTCAACT
TATTTGATTG AACAAAATTC GGCAGATCAA GCTTTAGAAT TATTAGAAAA AGCCCGTGGA
CTTGTTGATC AGCCAGAAGC CTTAACCTAT AACATTGCTG TTTGTTATTA CATGCAAGGA
GATTTTGCTA AATCACTGGC TTTACTTAAT TCGATTCCAG ACGATGAAGA GACCATGTAT
CAAAAGTCGT TAATTTTTAT GAAGTTAGGT CAATATCAAA AGGCATTAGC TTATGCTCTA
ACTTTGAAAA ATCAGGATGA GAGGACTTTA GAATTAATTG GCGACATTTG GCTTAGTCTG
GGTGATTTAA AAGCGGCAAA TCAAACTTAC AGTAAGATCC TAGAAGATCA AAGAAATGCA
AAAGTTAATT TTTTGCTTGG TTTAACTTTA TTTGATACTA ATCCTGATGA GGCAGAGAAT
TACTTTAAAT TATCAAAAGA ACAGGATCCT AAATATTTTG CACAAGCACA AAAGCAATAC
AATGCTGTAG CAAAATTGAT TAGAGGTAAA AATGGCAGAA ACTAG
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| Protein sequence | MDKKIANLYD AGKVDNAIHL LIKKINNHPK NIENYLQLST YLIEQNSADQ ALELLEKARG
LVDQPEALTY NIAVCYYMQG DFAKSLALLN SIPDDEETMY QKSLIFMKLG QYQKALAYAL
TLKNQDERTL ELIGDIWLSL GDLKAANQTY SKILEDQRNA KVNFLLGLTL FDTNPDEAEN
YFKLSKEQDP KYFAQAQKQY NAVAKLIRGK NGRN
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