Gene LGAS_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1186 
Symbol 
ID4439614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1187063 
End bp1189441 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content35% 
IMG OID639673023 
Productexonuclease V subunit alpha 
Protein accessionYP_814993 
Protein GI116629821 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000641615 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.675634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA CTAGTTTTAC TGGACGAATT AACGGAATTG TTTTTGAAAA TAATCAAGAT 
CTTTTCAAAA TTATTGATGT AGACTTGATT AGTAAATTAG CAGATTATGA TCGTGACAAT
ATCCGAGTAA CTGGTAATTT TGGTGATATT CAGATTGGCT CGACTTACAA GTTTGTTGGT
CAAGTTGTTG TACATGAAAA GTTTGGTAAA CAATTTCGCG TTAGTTCATA TGAACCAGTT
TTACCACATG AAGAGGGAAG TTTAGCGAAA TATCTAAGTT CTGATAAATT CCCCGGTATT
GGTAAAAAAG CCGCTGAGAA GATTATTGCT AGTTTAGGTA CTAATGCCTT GGATCTGATT
AAGTCCAACC CAACTGAAAT TGAAAACCTT GATTTAACGC CAAAGCAAAA GAATAGTTTA
CTATCTGGGA TTAATCAAAT GGACTCTTTC TCAGAAATTG TTATTAAGCT AGCTAAATAC
GGAATTAATA AAAAAACTGC TGGAAATATT TATAAAGCCT ATCATGGAGA TTCTCTAAAA
AAACTTGAAG AGGATCCTTA TCAAGCAGTT GGTGAAATTA GAGGCTTCGG CTTTAGGACA
GCAGATAATA TTGGTCAAGC ACTTGGAATT GAATTAAATG ATCCAAAAAG AGTTAGAGGT
GCAATTTTAA GTATTTTGCA GAGTGCTCTA AGTACGCTGG GAGACACTTA TGTGGCACTA
GATGATTTAC TAACTCAGGC ATATGATTTG GTTCAAGCTA GTTCTTATGA CGACTTGGCA
AATAGTGTGA ATGAGCTTCA GCGTCAAGGT AAGGTGGTTG TGTCAGGCGA CAAAGCAGCT
TTACAGGGAA TTTTTCAAAC TGAACTTGAT ATTTCAAATG AGTTAAAGCG TTTAGTCAAA
AATCGGGTAG AAAAAGAAAA ATTCAGTGAT GAAAAAATTG AGCATGCAAT TAATCATGCT
GAAGAAGAAC TTGAAATTAA GTATGACGAA ACGCAAAAAA AAGCTATTAA AAATGCTTTA
AATAATCCAA TTTCCATTCT TACTGGTGGA CCAGGTACTG GTAAGACAAC AATTATTAAT
GGAATTTTGA TGTGTTTAAA GGAACTTGCA GAGATTCCAA GTGGAGCCTT GTATAGTGAA
GATCCGCCAT TTTTGTTAGC TGCTCCAACA GGACGGGCTG CTAAGAGAAT GAGCGAGATT
ACCGATATTT CTGCTAAAAC TATTCACCGT TTGTTGGGGC TAGGTATTGG CGAAAATGAT
GCTACCGATG TTAATGAATT AAATGGTGAA ATTTTAATTA TTGATGAAAT GTCGATGGTT
GATATGTTTC TGTTCAAGCA GTTGTTATCG GGGATTAATT CGACAAAAAG AATTGTATTT
GTTGGTGACC AAGACCAGCT ACCTTCGGTT GGAGCGGGAA ATATTTTTAG TGATCTAATT
AAGTCAGAAG CGTTTCCAAC AACTAGACTT CAGGTAATTC ATCGACAAGG GGAAGATTCA
TCAATTATCA AGCTAGCTCA TGCAATTAAT GAAGAAGATG CTGAACAAAT AATTTTTAAT
AAAACTAAGA ACTATTCCTT TATTCCGTGT CAGCCAAGGT TAGTTGGAGA CGCAATTGAT
CAAATTGTTA ATTTAGCTAT TAAGCGTGGT TTTGAAAAGG ATGACGTTCA GGTCCTTGGA
GCTATGTATA ATGGTCAGGG CGGGATTACC CACTTGAATG ACATCTTGCA AGATGTGATG
AATCCAATGT CTTCTAAAAC CAAGGTAATT GAAGCACATA ATGAAAGTTT TAGAATCGGT
GATCGGATTT TACAATTGCA AAATAATCCT GAAAAGGATA TTTATAATGG TCAAATTGGC
AAAATTATTG GCCTCAATCC TGATGATAAG GCTAAAATAT TAATTGCTGA TTTTGATGGC
CGAGAAATAG AGTTTAGCGT TAAAGATTTA AATGATATTA CTCGTGCTTA TGCAATTACG
ATTCATAAAT CACAGGGATC AGAATTTCCG TTAGTTATTT TGAATCTTAC TATGCAAAAT
TATATGATGT TGAGACGTAA TTTGCTCTAT ACAGCAATTA CTCGAGCTGA GAAGAATCTC
GTTATGGTAG GAGAAAAAAA GGCCTATCTT ATGGCTTTAC GTACACCCGG AAATGATCGG
AAAACGGATT TAGCTTCTAA GATCAGACAT GAATTGGGTC TAAAAGAAGT AGTTGAGCAT
GATTCTAACG AAAATATTAA ACAAGAACAG GCTCAAACTG AAGTTAAAGA AGAGGTAACT
GAACCTAAAG ATTATATCTT AACTCCTGAT TTAATTTACT CTGGTAAAAT CAACCCAATG
ATTGGGATGG AAAAGATAGA ATTAAAAGCA AGAGATTAG
 
Protein sequence
MAETSFTGRI NGIVFENNQD LFKIIDVDLI SKLADYDRDN IRVTGNFGDI QIGSTYKFVG 
QVVVHEKFGK QFRVSSYEPV LPHEEGSLAK YLSSDKFPGI GKKAAEKIIA SLGTNALDLI
KSNPTEIENL DLTPKQKNSL LSGINQMDSF SEIVIKLAKY GINKKTAGNI YKAYHGDSLK
KLEEDPYQAV GEIRGFGFRT ADNIGQALGI ELNDPKRVRG AILSILQSAL STLGDTYVAL
DDLLTQAYDL VQASSYDDLA NSVNELQRQG KVVVSGDKAA LQGIFQTELD ISNELKRLVK
NRVEKEKFSD EKIEHAINHA EEELEIKYDE TQKKAIKNAL NNPISILTGG PGTGKTTIIN
GILMCLKELA EIPSGALYSE DPPFLLAAPT GRAAKRMSEI TDISAKTIHR LLGLGIGEND
ATDVNELNGE ILIIDEMSMV DMFLFKQLLS GINSTKRIVF VGDQDQLPSV GAGNIFSDLI
KSEAFPTTRL QVIHRQGEDS SIIKLAHAIN EEDAEQIIFN KTKNYSFIPC QPRLVGDAID
QIVNLAIKRG FEKDDVQVLG AMYNGQGGIT HLNDILQDVM NPMSSKTKVI EAHNESFRIG
DRILQLQNNP EKDIYNGQIG KIIGLNPDDK AKILIADFDG REIEFSVKDL NDITRAYAIT
IHKSQGSEFP LVILNLTMQN YMMLRRNLLY TAITRAEKNL VMVGEKKAYL MALRTPGNDR
KTDLASKIRH ELGLKEVVEH DSNENIKQEQ AQTEVKEEVT EPKDYILTPD LIYSGKINPM
IGMEKIELKA RD