Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1175 |
Symbol | |
ID | 4439603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1176866 |
End bp | 1177606 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673012 |
Product | DNA uptake protein related DNA-binding protein |
Protein accession | YP_814982 |
Protein GI | 116629810 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region [TIGR01259] comEA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000209814 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00000760392 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAAGCAG CAAAAAAATT GCTGCTTTTT TTCGTAATAA ATAATGAGGT GATAAAAATG GATTTAGAAA AAATCAAAGA ATTCATAATT GAAAAGAAAA TTGTTGTAAT TGGAGTTATT GTTTTGATCC TAGGCGGAGG ATATTTGATT CAGAAAAATA ATCAGCCGGC AGTCAATAAT ACTCAAGTGT TGAGTGAAAA TAATAAGACG CAGCCAGCAG AATTTTCTAA AAGTGAGAAT AAAACTACTC ATTCTACGTC AAACTTAAAT AGCTCCTCAA AACAAAACAC AGTAACTGTA GATATTGCTG GAGCTGTTAA ACATAGTGGC GTTTATATAT TAAAAAATGG TGCTAGATTA AACGATCTGT TAAAGATTTG TGGTGGCTTA ACTGATAAAG CAGAGACGCG TGCGATTAAT CGAGCAGCCT TATTAAAAGA TCAAGATCAA ATTTATGTCC CGCACATTGG TGAAAAAGTA GAAAATCCTC CTGGAAATGG AACTTCTAAT AATAATTCTG CTGCTTCTGA TTCTTCTAGT TCAAATTCAG AGCAAGTTCA TTTAAATACA GCAACAGTGC AGGACTTACA AAAGCTAAAT GGCGTTGGGC AAAAGAAGGC AGAGCAGATT ATTGCTTATC GTGATCAAAA TGGGGGCTTT AAGCAAATTG AAGATTTGAC TAAAGTAACA GGAATTGGTG AAAAGACTTT TGAAAAGCTC AAAGATCAGT TGGCACTCTA G
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Protein sequence | MKAAKKLLLF FVINNEVIKM DLEKIKEFII EKKIVVIGVI VLILGGGYLI QKNNQPAVNN TQVLSENNKT QPAEFSKSEN KTTHSTSNLN SSSKQNTVTV DIAGAVKHSG VYILKNGARL NDLLKICGGL TDKAETRAIN RAALLKDQDQ IYVPHIGEKV ENPPGNGTSN NNSAASDSSS SNSEQVHLNT ATVQDLQKLN GVGQKKAEQI IAYRDQNGGF KQIEDLTKVT GIGEKTFEKL KDQLAL
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