| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1172 |
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| Symbol | rpsT |
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| ID | 4439600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1173305 |
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| End bp | 1173571 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639673009 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_814979 |
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| Protein GI | 116629807 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0000575412 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00000000402538 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGATTTTGA TGCCACAAAT TAAATCAGCA ATTAAACGTG TTAAGACTAC TGCTACTGCT
AACAAGCGCA ATGCTGCTGA ATTAAGTAAA TTGAGAACTG CTGTAAGAAA ATTCAACGAA
GCTGTTGAAA ATGACGCAAA AGATGTCCTC GATTTAGAAG TTAAAGCTGC ACGTGCTTTA
GATAAGGCTG CTTCTAAAGG TCTTATTTCT AAGAACAAGG CTAACCGTGA TAAGTCACGC
TTATCTAAGA AGGCTGCTAA CAAGTAA
|
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| Protein sequence | MILMPQIKSA IKRVKTTATA NKRNAAELSK LRTAVRKFNE AVENDAKDVL DLEVKAARAL
DKAASKGLIS KNKANRDKSR LSKKAANK
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