| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1166 |
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| Symbol | clpX |
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| ID | 4439629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1165774 |
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| End bp | 1167039 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639673003 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_814973 |
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| Protein GI | 116629801 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000046981 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 7.73066e-26 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTAATG AAATTACTGA ACAAGAAGAA GTAAAATGTT CTTTTTGCGG TAAACCACAG
TCACAAGTTA AAAAAATTGT GGCTGGAAAT GGAGTCTACA TTTGTAATGA ATGTATTGAT
CTTTCCAAAA AAATTATTGA TGATGAATTA AAAGCAGATT CTATCAAAGA AACTAAAGAT
CTACCTAAGC CAATGGAAAT TAAAAAGCAA CTAGATGAGT ACGTAATTGG CCAAGATCGT
GCCAAGAAGG TCCTATCGGT TGCCGTTTAT AATCACTATA AACGTATTAG TCAAATGGAT
ATCGATAGTT CTGGAACTGA ATTGCAAAAG TCAAATATTG CTTTGATTGG ACCAACTGGT
TCTGGTAAGA CGTATTTAGC TCAAACTTTG GCTAAGATTT TAAATGTTCC ATTTGCTATT
GCAGATGCCA CAACATTAAC TGAAGCTGGT TATGTTGGTG AAGATGTAGA AAACATCTTG
CTTAAATTAT TGCAGAATGC TGACTATGAT TTAGAGCGAG CACAACGCGG AATTATTTAC
ATTGACGAAA TTGATAAGAT TTCTAAAAAA GCAGAAAATG TTTCAATTAC GCGTGATGTT
TCCGGTGAAG GTGTTCAGCA ATCTCTTCTT AAGATCTTAG AAGGAACCAT TGCTTCTGTT
CCACCGCAAG GCGGACGTAA GCATCCACAA CAGCAGATGA TTAAGATTGA TACTACTAAT
ATCTTATTCA TTGTTGGTGG TGCCTTTGAT GGTATTGAAA ATATTGTTAA GAATCGTCTT
GGTAAGAAGA CGATCGGTTT TGGTGCAGAA AACGGTCTTA ATCAAGTAGA TGCTGATGAT
TGGCAAAAGA ATCTTACGAC TGGCGACTTA GTTAAATTTG GTTTAATTCC TGAATTCATT
GGTCGTATTC CAATTATCAC TACACTTGAT AAGTTGAGTA CCAAAGACTT GATCAGAATT
TTGACTGAAC CAAAGAATGC CCTAGTAAAG CAATATAAGA AATTGCTGTC TCTTGATAAT
GTTGATCTTG AATTTACTGA GGGTGCACTT AAGGCAATCG CTGATATGGC AATTAGTCGT
CATATGGGTG CACGTGGATT ACGCTCAATC GTTGAAAATT CATTGATGGA CGTGATGTAT
CGCACGCCAA GCGAAGATAA TATTGAAAAG GTAGAAATTA CCAAGGATGT TATTACTAAG
CATGCGCAGC CTAAGATTAC TTATAAAGAA AATGAGTCTC AAGAAGCAAG TGAGGCAGCT
AAATAA
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| Protein sequence | MANEITEQEE VKCSFCGKPQ SQVKKIVAGN GVYICNECID LSKKIIDDEL KADSIKETKD
LPKPMEIKKQ LDEYVIGQDR AKKVLSVAVY NHYKRISQMD IDSSGTELQK SNIALIGPTG
SGKTYLAQTL AKILNVPFAI ADATTLTEAG YVGEDVENIL LKLLQNADYD LERAQRGIIY
IDEIDKISKK AENVSITRDV SGEGVQQSLL KILEGTIASV PPQGGRKHPQ QQMIKIDTTN
ILFIVGGAFD GIENIVKNRL GKKTIGFGAE NGLNQVDADD WQKNLTTGDL VKFGLIPEFI
GRIPIITTLD KLSTKDLIRI LTEPKNALVK QYKKLLSLDN VDLEFTEGAL KAIADMAISR
HMGARGLRSI VENSLMDVMY RTPSEDNIEK VEITKDVITK HAQPKITYKE NESQEASEAA
K
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