| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1165 |
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| Symbol | engB |
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| ID | 4439628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1165190 |
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| End bp | 1165774 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673002 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_814972 |
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| Protein GI | 116629800 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000846962 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 3.27635e-26 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAAAGTCG TAGATACAGA ATTTGTAATT AGTGCTGTTT CTGAAAAACA ATATCCTAAG
GATGATTTGC CAGAGTTTGC TCTAGCTGGA CGTTCAAATG TTGGCAAGTC GAGCTTGATT
AATACAATTG TTAATCGGCG TAAACTTGCT CGTACTTCTC AACAACCAGG TAAAACCCAG
ACACTTAATT TTTATAAAGT AAATAATGAA TTATATTTGG TTGACGTACC AGGTTATGGT
TATGCTAAAG TTTCCAAAAA GCAAAGAGCT GCTTTTGGTG AAATGATTCA GGATTATCTT
GAAACTCGTG CTGATTTGAA GGGACTCATT CTTTTAGTTG ACGCGCGTCA CGATCCAACT
GCGGATGATA TTAATATGTT TAATTATGCA CTCTATCTTG ATATTCCAAT TTTAGTGGTA
GCAACTAAGA TGGATAAGCT TAAGAAGATG GAAGCAAGTC AAATTAAGCA AAAGATTGGT
AAGAGCTTAG ACTTAAAACA AGAGAATGTA TCTTTTTTAC CATTCTCTAG TGTTTCTAAA
TTAAACGTCG ATAAATTCTG GGACTGGATC GAGGATAAAA TGTAA
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| Protein sequence | MKVVDTEFVI SAVSEKQYPK DDLPEFALAG RSNVGKSSLI NTIVNRRKLA RTSQQPGKTQ
TLNFYKVNNE LYLVDVPGYG YAKVSKKQRA AFGEMIQDYL ETRADLKGLI LLVDARHDPT
ADDINMFNYA LYLDIPILVV ATKMDKLKKM EASQIKQKIG KSLDLKQENV SFLPFSSVSK
LNVDKFWDWI EDKM
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