Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1156 |
Symbol | |
ID | 4439619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1157418 |
End bp | 1158278 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672993 |
Product | capsular polysaccharide biosynthesis protein |
Protein accession | YP_814963 |
Protein GI | 116629791 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000219434 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 4.797860000000001e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGAAAACA GTACAAAGAC TGAAAATACA ATCGATTTAC GTAGATTATG GATGCTCCTT CGAGCACATA TCTGGTCTAT TATTTTATGG GCAATTGGTT TAGGAGCAGT TGGTTTTATT CTAGCTGCTT TTGTGGTTGA ACCTAAATAT ACTTCAACTA CTCAGATCTT AGTTAACCAG AAACGTAATC CAGTAGATGC TGGTCAGGCA TTGACTGCAC AACAGGCTGA TGTACAAGTA ATTAATACTT ATAAAGATAT TGTTACTAGT CCTGTTATTT TGAAAGACGC TTCTAAATGG ATCAAGAATC CTACTGAAGT AGTAAAGCCT GCTAAAAAGG CTAAGTATAA GACTTTAGCT GATGGTACTA AGAAGTTAGT TAGCCCAGCA AAACCAGCAG TAATTAGAAG AGCAGGTCGG GGTTATAACG TTAGCGCTAA AGAAATGCAA AAATCAATTT CTGTAACTAC TCAACAAAAT TCTCAAGTAT TTACTATTAG TGCCAAAAGT AACGATCCTG AAAAAGCTCA AGCAATTGCT AATGCAGTGG CTCAAACTTT TAAAGGTAAG ATCAAAACAA TTATGAACGT TAATAATGTT ACTATTGTTT CCCCCGCTGC AATTGGTGCA AAAACATTCC CTAAAACTAG TTTATTTACT TTAGCAGGAA TTGTACTTGG TTTAATTATT AGTATTGCGT TAATTGTTTT ACGCGATTCA TTTAATACTA CGGTAAGAGA TGATGATTAC TTGACTAAAG AATTGGGATT AACTAATTTA GGTCATGTAT CACACTTTCA CTTATCTAAT AAGTTTAGTA TTAACAATAA TAATGATTCT GATAAAAAGA AACGAGTATA G
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Protein sequence | MENSTKTENT IDLRRLWMLL RAHIWSIILW AIGLGAVGFI LAAFVVEPKY TSTTQILVNQ KRNPVDAGQA LTAQQADVQV INTYKDIVTS PVILKDASKW IKNPTEVVKP AKKAKYKTLA DGTKKLVSPA KPAVIRRAGR GYNVSAKEMQ KSISVTTQQN SQVFTISAKS NDPEKAQAIA NAVAQTFKGK IKTIMNVNNV TIVSPAAIGA KTFPKTSLFT LAGIVLGLII SIALIVLRDS FNTTVRDDDY LTKELGLTNL GHVSHFHLSN KFSINNNNDS DKKKRV
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