Gene LGAS_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1156 
Symbol 
ID4439619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1157418 
End bp1158278 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content34% 
IMG OID639672993 
Productcapsular polysaccharide biosynthesis protein 
Protein accessionYP_814963 
Protein GI116629791 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000219434 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.797860000000001e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAAAACA GTACAAAGAC TGAAAATACA ATCGATTTAC GTAGATTATG GATGCTCCTT 
CGAGCACATA TCTGGTCTAT TATTTTATGG GCAATTGGTT TAGGAGCAGT TGGTTTTATT
CTAGCTGCTT TTGTGGTTGA ACCTAAATAT ACTTCAACTA CTCAGATCTT AGTTAACCAG
AAACGTAATC CAGTAGATGC TGGTCAGGCA TTGACTGCAC AACAGGCTGA TGTACAAGTA
ATTAATACTT ATAAAGATAT TGTTACTAGT CCTGTTATTT TGAAAGACGC TTCTAAATGG
ATCAAGAATC CTACTGAAGT AGTAAAGCCT GCTAAAAAGG CTAAGTATAA GACTTTAGCT
GATGGTACTA AGAAGTTAGT TAGCCCAGCA AAACCAGCAG TAATTAGAAG AGCAGGTCGG
GGTTATAACG TTAGCGCTAA AGAAATGCAA AAATCAATTT CTGTAACTAC TCAACAAAAT
TCTCAAGTAT TTACTATTAG TGCCAAAAGT AACGATCCTG AAAAAGCTCA AGCAATTGCT
AATGCAGTGG CTCAAACTTT TAAAGGTAAG ATCAAAACAA TTATGAACGT TAATAATGTT
ACTATTGTTT CCCCCGCTGC AATTGGTGCA AAAACATTCC CTAAAACTAG TTTATTTACT
TTAGCAGGAA TTGTACTTGG TTTAATTATT AGTATTGCGT TAATTGTTTT ACGCGATTCA
TTTAATACTA CGGTAAGAGA TGATGATTAC TTGACTAAAG AATTGGGATT AACTAATTTA
GGTCATGTAT CACACTTTCA CTTATCTAAT AAGTTTAGTA TTAACAATAA TAATGATTCT
GATAAAAAGA AACGAGTATA G
 
Protein sequence
MENSTKTENT IDLRRLWMLL RAHIWSIILW AIGLGAVGFI LAAFVVEPKY TSTTQILVNQ 
KRNPVDAGQA LTAQQADVQV INTYKDIVTS PVILKDASKW IKNPTEVVKP AKKAKYKTLA
DGTKKLVSPA KPAVIRRAGR GYNVSAKEMQ KSISVTTQQN SQVFTISAKS NDPEKAQAIA
NAVAQTFKGK IKTIMNVNNV TIVSPAAIGA KTFPKTSLFT LAGIVLGLII SIALIVLRDS
FNTTVRDDDY LTKELGLTNL GHVSHFHLSN KFSINNNNDS DKKKRV