| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1147 |
|---|
| Symbol | |
|---|
| ID | 4439645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1150560 |
|---|
| End bp | 1151612 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 639672985 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_814955 |
|---|
| Protein GI | 116629783 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000216954 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0000000335668 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATAT GTTTTGTTTT GCCCGGGGTT GCGAGACAGC CTGTTGGTGG ATATAAAATG
GCTTTTGAAT ATGCTAATAG ATTGGTTAAA GAAAATCATG AGGTTTTAAT CCTGTATTTA
AATCAGGACC TATTAAAGAA TTATTCTGTT CCTTTAGTTG TAAAACGAAA AATCGCAAAA
ATACTTACAA AAATTGAGCC CAAATGGTTT GATTTGAATA AAAAAATTAA AAAAATTTCT
AACTTAGATT TAGATTATAA GGAAAAATTA GGAAAACTTG ATGTATGTAT AGCTACATCT
GCTGAAAAGA CAGTTGAAGA AGTAAATAAA AACTTAATTG CAAAAACTAA GCTTTATTTG
ATTCAAGATT ATGAAAATTG GAATATTAGT GATAAAGAAC TAATAGCTAC ATATAAATTG
GGTTTTAAAA ACATTGTGGT GGCTAAGTGG TTAAAACAAA TAGTGGATCA ATATTCTCCT
ACTGAGTCTG TACTTATTCC TAATGCTATT GATACGTCTA TTTACACGGA AACTGTACCA
ATTCAGAATA GAGATAATCA TACTATTGCG CTTCTCTACC ATGAATCGCC GCATAAAGGA
TTGAAGAATG CTTTTAAAGT TTTAGATAAA TTGAAACAAA AATATCCTGA TTTAAAAGTA
ATTATGTTTG GTAAATTTCC AAAACCTGAA CTACCGAATT GGATTACTTA TTATAAAGGT
GCGTCACAGA AAAAGACTGT AGAAATATAT AATTCTGTGA AGGTTTTTTT GTGTTCAACT
ATTGAAGAAG GCTTTGGGCT GACGGGAATT GAGGCAATGG CATGTGGAGC ATGTTTAGTT
TCCACAGATT ATCGTGGAGT AAGAGAGTAT GCCGTCAATA ATTATAATTC TTTACTTTCA
CCTGTTGGAG ATATAGATGC TCAAGTTGAG AATGTGATAC GTATTTTTGA AAATAAAGAA
TTACAAAAGA ATATATCATC TAATGGTATT CAGCATGTAA AGAAATTTAA ATGGTCAGAA
GCTATGAAAA AATTAAATAA GACGATAGAA TGA
|
|---|
| Protein sequence | MRICFVLPGV ARQPVGGYKM AFEYANRLVK ENHEVLILYL NQDLLKNYSV PLVVKRKIAK
ILTKIEPKWF DLNKKIKKIS NLDLDYKEKL GKLDVCIATS AEKTVEEVNK NLIAKTKLYL
IQDYENWNIS DKELIATYKL GFKNIVVAKW LKQIVDQYSP TESVLIPNAI DTSIYTETVP
IQNRDNHTIA LLYHESPHKG LKNAFKVLDK LKQKYPDLKV IMFGKFPKPE LPNWITYYKG
ASQKKTVEIY NSVKVFLCST IEEGFGLTGI EAMACGACLV STDYRGVREY AVNNYNSLLS
PVGDIDAQVE NVIRIFENKE LQKNISSNGI QHVKKFKWSE AMKKLNKTIE
|
|---|
| |