Gene LGAS_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1138 
Symbol 
ID4439636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1140869 
End bp1141828 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content25% 
IMG OID639672977 
Productabortive infection bacteriophage resistance protein 
Protein accessionYP_814947 
Protein GI116629775 
COG category[V] Defense mechanisms 
COG ID[COG4823] Abortive infection bacteriophage resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000644215 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.00199936 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGAAT TTAAAAATAT TGATGAACAA ATTGAGGTTT TGAAAAATCG TGGTTTAGTT 
TTTAAAGACT TGGACTTAGC TAAAAGATAT CTTCTTACTA ATAATTACTA TAATATTATT
AATGGGTATG GAAAGTATTT TCAAAATAAT ACTGATTTAT TTATTAAAGG GACAACTTTT
GATGAAGTTC GTAGCTTATA TTTTTGTGAT AAACAATTAA AACAAGCTTT TTTTAATTCT
ATCTCGAATG TAGAACATCA CCTAAAGTCT ATTTTTGCGT ATCGATTTGC AGAAAAATTT
AAGAATAAAA GATATGCGTA TTTAGATATT AATTCCTATG ATTCAAATAA AATACTTTCC
GTCGGAAGAT TAATTAGTGA TTTGTCGCGA ATAATTAATT TTTATAAAGA TAAGTCTAAT
AATCCGATTC ATCATTATGT TAAAAAATAT AATGATGTAC CTATTTGGAT TATGGTTGAA
TTTCTAGATT TCGGAAAATT ATGTGCGATG ATTAAAAATT CTAAGAGGAG TATTCAAAAT
AAAATTTGTA AAGATCTAAT GACTTTTATT CATGAGAATA TAGGAGATTT AAACGAACAT
TTTACACCAG AAATTATGAT TTCATTTATT GAGAATATTC ATGAATTAAG AAATGTTTGT
GCGCATAATA ATCGTTTACT AGATTTTAGG TGTAAGGCAG ATTCAAGATA TTTTAGCGCT
TTACATTTAA AGTATAATAT TAAAGATAAT AATAGTAGAA GGTATGCATA CTCAGTCTTT
GTAAGTATGC AATGTTTTTT AAGTCCGACT GAATTTAAAA TTCTGAGTAA TACTATTCGA
AAAAGACTAA ATTTGCTAAA AAAACACTTG AACTCTATAG ATATACAAGA AATACTAAAT
TTATTAAAAT TTCCAAATGA ATGGTTGACT CAACCTAGAT TAAAACAGCA GTGGGATTAA
 
Protein sequence
MKEFKNIDEQ IEVLKNRGLV FKDLDLAKRY LLTNNYYNII NGYGKYFQNN TDLFIKGTTF 
DEVRSLYFCD KQLKQAFFNS ISNVEHHLKS IFAYRFAEKF KNKRYAYLDI NSYDSNKILS
VGRLISDLSR IINFYKDKSN NPIHHYVKKY NDVPIWIMVE FLDFGKLCAM IKNSKRSIQN
KICKDLMTFI HENIGDLNEH FTPEIMISFI ENIHELRNVC AHNNRLLDFR CKADSRYFSA
LHLKYNIKDN NSRRYAYSVF VSMQCFLSPT EFKILSNTIR KRLNLLKKHL NSIDIQEILN
LLKFPNEWLT QPRLKQQWD