| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1134 |
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| Symbol | |
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| ID | 4439667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1137040 |
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| End bp | 1137648 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639672973 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme |
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| Protein accession | YP_814943 |
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| Protein GI | 116629771 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 84 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.501931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACAAA TTAAAGTTGA AAAAAATGTT GGTGGTATTG AAGGTTTAGC AGTTATTACA
CCAACTGTTC ATGGAGACGA TCGTGGCTAC TTCATGGAAA CTTTTAACCA AAGAGACATG
ATGGATGCCG GCTTTAGCAT TAACTTTGTT CAAGACAACC AATCAAGTTC AACTAAGGGT
GTGCTTCGCG GTTTACACTT CCAAAAGAAG TACCCACAAA TTAAATTAGT TCGTGCAGTT
CGTGGTAGCG TATTTGATGT TGCTGTTGAT CTTCGTAGTG AATCTAAGAC CTATGGCAAG
TGGTACGGTG TTGAATTAAC TGCAGAAAAT AAAAAACAAT TCTTAATCCC ACAAGGTTTT
GCTCATGGTT TTCTTGTTTT AAGTGATGTA GCAGAATTTT GTTACAAAGT TAATGACTTC
TGGCACCCAA ACGATGAAGG TGGTATGGCT TGGAACGATC CTGAAATTGG TATTGAATGG
CCACACCTTA AGGGTGATTA CCCAGGTAGT CCAGATGCTT CTGGTTATAC TCTTGATGAT
GGTACCAAGC TCAACATGGC TGAACGTGAT CAAGAATGGA AGGGCTTAAA GGATACTTTT
AAGTTTTAA
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| Protein sequence | MGQIKVEKNV GGIEGLAVIT PTVHGDDRGY FMETFNQRDM MDAGFSINFV QDNQSSSTKG
VLRGLHFQKK YPQIKLVRAV RGSVFDVAVD LRSESKTYGK WYGVELTAEN KKQFLIPQGF
AHGFLVLSDV AEFCYKVNDF WHPNDEGGMA WNDPEIGIEW PHLKGDYPGS PDASGYTLDD
GTKLNMAERD QEWKGLKDTF KF
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