Gene LGAS_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1123 
Symbol 
ID4439656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1128028 
End bp1128879 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content35% 
IMG OID639672963 
Producthypothetical protein 
Protein accessionYP_814933 
Protein GI116629761 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000765739 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATATA TGACTGAAGA AAAGAAAGAA AATCAAAAAA TCGTTAACTT AATTATTATC 
TCTGACTCTG TCGGGGATAC TGCCTTTAAC ATGGTTCAAG CCGGTGCTGT TCAATATCCA
GACGTGAAAT TTAATTACCG TCGCTATCCA TTTATTACTA ATCGTGAAAA ACTAGAGAAA
GTTTTCAACG AAATCACAGA ATTTGAAAAT GTATTAATCG CATTTACGCT AATTCACGAA
GATGAACAAT TAGCCGCAAT TAAATTTGCA CGTGAACATA ATATGAAGTA TGTAGACCTT
CTTTCTGGTG TAATTGAAAA TATTCATTCT TTAACTGGCG AAGAACCAAA ACACGAAATT
GGTGCTGTTC ACCACATGGG ACAAAACTAT TTCGACAGAA TTTCCGCAAT GGAATTTGCC
GTAATGTATG ATGATGGAAA AGATCCTAAA GGTTTCTTAG AAGCAGACGT TGTTTTGCTT
GGAGTTTCAA GAACTTCAAA GACCCCTCTT TCATTGTTCT TAGCAAACAA GAATTTGAAA
GTAGCTAACT TACCTCTTGT TCCTCAAACT CATATTCCAG ATGAAATTTA TAAAGTTGAT
CCTAAAAAGA TTATCGGTTT GACTAATGAC CCATCCGTCT TAAATGAAAT TAGACGTCAA
AGAATGATTG CTTACGGCTT GAATCCTGAT ACGACTTACT CAAATATGGA TTCTATCAAT
GCCGAACTTG ACGCTGCTAA TAAGCTTTAT AAGAAACTTG GTTGTTACGT AATTAATGTT
GCTCATCGTT CAATTGAAGA GACAGCTGCT TTAATTATGG AACACCTCGG CATCGATGAC
TATGCGAAAT AA
 
Protein sequence
MKYMTEEKKE NQKIVNLIII SDSVGDTAFN MVQAGAVQYP DVKFNYRRYP FITNREKLEK 
VFNEITEFEN VLIAFTLIHE DEQLAAIKFA REHNMKYVDL LSGVIENIHS LTGEEPKHEI
GAVHHMGQNY FDRISAMEFA VMYDDGKDPK GFLEADVVLL GVSRTSKTPL SLFLANKNLK
VANLPLVPQT HIPDEIYKVD PKKIIGLTND PSVLNEIRRQ RMIAYGLNPD TTYSNMDSIN
AELDAANKLY KKLGCYVINV AHRSIEETAA LIMEHLGIDD YAK