Gene LGAS_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1119 
Symbol 
ID4439652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1125644 
End bp1126171 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content33% 
IMG OID639672959 
Productmetal-dependent hydrolase 
Protein accessionYP_814929 
Protein GI116629757 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAACT TAGATATTTC TTTCAATGAT GAGGTTAATT TCTTAAAAAA TGATGATAAA 
GACTGGATTC CTTGGATTAC CAATCTGCTT TTGTCTGCCA AAAAAGAAAT TAATAAGAAG
AATGCTCAAG AAATGAGTAT TAATTTTGTT TCCTCCGAAA AAATTCACGA AATCAATAAA
AAATATCGTG GAAAAGATCG ACCAACCGAT GTAATTTCCT TTGCAATAGA AGATGGATTA
GACGAAGACT TTATGGCTGC CTTTAATGAT GATCCTGATT TTGTTGAAGA TATTGGAGAT
CTATTCCTTT GTCCAGAGGT AATAAAAAGA CATAGTGTCG AGTATGAAAC TGGATTTAAC
CGTGAGTTTG GATATACACT AGTTCATGGA TACTTGCATT TAAATGGCTT TGATCATATT
GAAGATGATG AAGCTAAAGT AATGTTTGGT ATCCAAGGCA AAGTTTTACG TGAATATGGA
CTTCCGCTTC ATCCAGATCA GGAAAATCAC GGAAAGCAAA TTCACTAA
 
Protein sequence
MNNLDISFND EVNFLKNDDK DWIPWITNLL LSAKKEINKK NAQEMSINFV SSEKIHEINK 
KYRGKDRPTD VISFAIEDGL DEDFMAAFND DPDFVEDIGD LFLCPEVIKR HSVEYETGFN
REFGYTLVHG YLHLNGFDHI EDDEAKVMFG IQGKVLREYG LPLHPDQENH GKQIH