Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1119 |
Symbol | |
ID | 4439652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1125644 |
End bp | 1126171 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639672959 |
Product | metal-dependent hydrolase |
Protein accession | YP_814929 |
Protein GI | 116629757 |
COG category | [R] General function prediction only |
COG ID | [COG0319] Predicted metal-dependent hydrolase |
TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATAACT TAGATATTTC TTTCAATGAT GAGGTTAATT TCTTAAAAAA TGATGATAAA GACTGGATTC CTTGGATTAC CAATCTGCTT TTGTCTGCCA AAAAAGAAAT TAATAAGAAG AATGCTCAAG AAATGAGTAT TAATTTTGTT TCCTCCGAAA AAATTCACGA AATCAATAAA AAATATCGTG GAAAAGATCG ACCAACCGAT GTAATTTCCT TTGCAATAGA AGATGGATTA GACGAAGACT TTATGGCTGC CTTTAATGAT GATCCTGATT TTGTTGAAGA TATTGGAGAT CTATTCCTTT GTCCAGAGGT AATAAAAAGA CATAGTGTCG AGTATGAAAC TGGATTTAAC CGTGAGTTTG GATATACACT AGTTCATGGA TACTTGCATT TAAATGGCTT TGATCATATT GAAGATGATG AAGCTAAAGT AATGTTTGGT ATCCAAGGCA AAGTTTTACG TGAATATGGA CTTCCGCTTC ATCCAGATCA GGAAAATCAC GGAAAGCAAA TTCACTAA
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Protein sequence | MNNLDISFND EVNFLKNDDK DWIPWITNLL LSAKKEINKK NAQEMSINFV SSEKIHEINK KYRGKDRPTD VISFAIEDGL DEDFMAAFND DPDFVEDIGD LFLCPEVIKR HSVEYETGFN REFGYTLVHG YLHLNGFDHI EDDEAKVMFG IQGKVLREYG LPLHPDQENH GKQIH
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