| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1115 |
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| Symbol | glyS |
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| ID | 4439683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1120681 |
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| End bp | 1122753 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672955 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_814925 |
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| Protein GI | 116629753 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.217479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAG ATTATTTATT TGAAATTGGC ACTGAAGAAA TGCCAGCTCA CGTTGTTTCT
AGAAGTGTTA AGCAATTAGC GGATCGTACT AAGAAGTATC TTAAGGAAAA TGGTCTTTCT
TTTAAGGACA TTAAGACTTA TTCAACTCCA CGTCGCTTGA CTATTTTGGT TGAAGACTTA
GCTGAAAAAC AAGATGATAT TGATGAAGTT AAAAAAGGTC CTGCTAAGAA GATCGCTCAA
GATAAAGACG GCAATTGGAC AAAAGCTGCT CAAGGTTTTG CTCGTGGTCA AGGGATGACT
ACTGATGATA TTTATTTTGA AGAGCTTAAA GGAACTGAAT ATGCTTATGT TCATGTTCAA
AAAGAAGGTA AAAAAGCTTC TGACATTTTA ATGGGCATGA GCGATATCAT TAAAGCCATG
ACTTTCCCAA CTAAAATGCG TTGGGACAGC AATGATTTTG AGTTTGTACG TCCAATTCAT
TGGATGGTTT CTTTACTTGG TAGTGAAGTT GTACCAGTTA AGTTACTTGA TGTAGTTGCT
GGCCGCAAGA CTCAAGGTCA CCGTTTTTTA GGTGATAGTG TGGTACTTGC AAATGCAGAT
GACTATGAAG AAGCTTTGAA GAGTCAATAT GTAATTGCTG ATGCTGATGA ACGTAAGGGC
ATGATTCTTA ATCAAATTCA AGAACTAGTT GCTCAACATA ACTGGAAAGT AAATATTGAT
AAGGGATTAC TTGAAGAAGT TACTAACTTA GTTGAATATC CAACTGTCTT TGCTGGTTCT
TTTGATGAAA AGTATTTGAA TATTCCAGAT GAAGTTTTAA TTACTTCAAT GAAAGATAAT
CAAAGATACT TTGAAGTTTA TGATGAAAAC GGCAAGTTGA TTAATCACTT TATTGCTGTT
AGAAATGGTA ATAGTGAGTA CTTAGATAAC GTAATTGCCG GTAACGAAAA AGTTCTTGTT
GCACGTTTAG ATGACGCTCA ATTCTTCTAT GATGAAGATA AAAAATACCC ATTAGCTCAC
TTTGTTGACA AGCTTAAGAA TGTTTCCTTC CACGACAAGA TTGGCTCAGT TGCCGAACAT
ATGGCACGTG TTCATATTAT TGGTGACTAC CTTGGTAAGA AATTTAATAT TTCAGAAACT
GAAATGAAGG ATTTTGATCG AGTTAGTGAT ATTTACAAAT TCGATCTTGT TACTTCAATG
GTTGGTGAAT TTGCCGAATT ACAAGGTGTA ATGGGAATGC ATTATGCTCG CTTAACTGGT
GAAGATGAAA ATGTTAGTGT AGCAATTAAA GAAAGTTACA TGCCAACTAG TGCTGAGGGA
GATTTGCCAA GTACAACTGT TGGTTCACTT CTTTCAATTG CTGATAAGTT AGATACAATT
ATTTCATTCT TCGGTGCAGG CATGATCCCT TCATCATCTA ATGACCCATA TGCTTTAAGA
AGAAATGCAT ATGGAATTGT AAGAATCTTA TTAAACGAAG GTTGGTCACT TCCTGTTAAA
GATGTTTTAC CAGAATTAAT TCAATTATTG TCTGGCAAAA CTGCAGCTAA ATTACCTAAG
GATGCTGAAG CTGAAAATGA AATTGCTGAC TTTATCCGTG ACCGTGTAAA ACAGCAATTA
CAAGTTGAAA AATATGATTA CGACGTTATT GATGCAGTCC TTGCATCTAG CCAGCAAGAT
CCAATTCAAA TTTTAGCAGC AGCTAAGACT TTGCAAATGC ATCATGACGA TGCTGACTTT
AAGCCGGTAG TTGAAAGTTT GACTAGAATT ACTAACATCT TGAAGAAGGC CAAATATAGA
AATGCTGCTA AAGTTGATGA AAGTCTTTTC CAAGATGTAA GTGAAGAAGA ATTAAATGCT
GGTGTAAATG CACTAGAAGA AAATACTGAT TTGAGTATTG CCGATCTATA CAAAGGCTTT
GTTGAATTAC AACCTGTAAT TAACAATTAC TTTGAAAGTA ATATGATTCT TGATAAAGAT
GAAAAAGTAA AGAATAATCG TTTAGCACAA TTATTAAAGG TTAATAACTT GGCTGATCGA
ATGGGTGACT TGAGTAAATT AGTAATTAAA TAA
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| Protein sequence | MTKDYLFEIG TEEMPAHVVS RSVKQLADRT KKYLKENGLS FKDIKTYSTP RRLTILVEDL
AEKQDDIDEV KKGPAKKIAQ DKDGNWTKAA QGFARGQGMT TDDIYFEELK GTEYAYVHVQ
KEGKKASDIL MGMSDIIKAM TFPTKMRWDS NDFEFVRPIH WMVSLLGSEV VPVKLLDVVA
GRKTQGHRFL GDSVVLANAD DYEEALKSQY VIADADERKG MILNQIQELV AQHNWKVNID
KGLLEEVTNL VEYPTVFAGS FDEKYLNIPD EVLITSMKDN QRYFEVYDEN GKLINHFIAV
RNGNSEYLDN VIAGNEKVLV ARLDDAQFFY DEDKKYPLAH FVDKLKNVSF HDKIGSVAEH
MARVHIIGDY LGKKFNISET EMKDFDRVSD IYKFDLVTSM VGEFAELQGV MGMHYARLTG
EDENVSVAIK ESYMPTSAEG DLPSTTVGSL LSIADKLDTI ISFFGAGMIP SSSNDPYALR
RNAYGIVRIL LNEGWSLPVK DVLPELIQLL SGKTAAKLPK DAEAENEIAD FIRDRVKQQL
QVEKYDYDVI DAVLASSQQD PIQILAAAKT LQMHHDDADF KPVVESLTRI TNILKKAKYR
NAAKVDESLF QDVSEEELNA GVNALEENTD LSIADLYKGF VELQPVINNY FESNMILDKD
EKVKNNRLAQ LLKVNNLADR MGDLSKLVIK
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