| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1087 |
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| Symbol | carB |
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| ID | 4439690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1093643 |
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| End bp | 1096831 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672928 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_814898 |
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| Protein GI | 162139889 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAA GAACAGATAT TCATAAAATT ATGGTGATTG GTTCTGGCCC AATTATTATT
GGTCAAGCTG CTGAGTTTGA TTATTCAGGT ACTCAAGCCT GCTTAGCTCT TCGAGAAGAG
GGCTATGAGG TTGTCTTAGT CAATTCAAAT CCGGCAACGA TTATGACTGA TACGACTATT
GCCGATAAGG TCTATATTGA ACCTTTAACA GTAGAATCAA TTTCAAGAAT TATTAGACAA
GAATATCCTG ATGCAATCCT GCCAACTCTT GGTGGTCAAG TTGGATTAAA CATGGCGCTA
GCTTTGGCTA AAACTGGAAT TTTAGACGAA TTAAATATTG AATTACTAGG AACAAAACTT
TCTTCCATTG AACAAGCAGA AGATAGGGAG AAGTTTAAAG AATTATGTAA AAAATTAGGT
GAACCAGTTC CTCCATCAAA GACTGTTAAT ACCGTTGAAG ATGCTTTAGC ATTTGGGGAT
GAAATCGGTT ATCCAATCAT TGTTAGACCA GCATTTACAA TGGGTGGAAC TGGTGGCGGA
ATCTGTCATA GTCATGAAGA ATTAGCTGAA ATCGCTAAGA ATGGGTTAGA GCTTTCTCCA
GTGACTGAAT GTTTAATTGA AAAATCAATC GCTGGTTATA AAGAAATTGA GTTTGAGGTA
ATGCGGGACC ATGACGATAA TGCAATGATT GTCTGCTGCA TGGAAAACTT TGATCCGGTT
GGTATTCATA CGGGAGATTC AATTGTCTTT TCACCTAGTC AAACTTTAAG CGATAAAGAG
TACCAAATGC TTAGAGATTG TTCATTACGC TTAATTCGTG CTCTTAAGAT CGAAGGTGGT
TGTAATGTAC AACTAGCTTT AGATCCAAAT AGTTTTGATT ATGATGTGAT TGAAGTTAAT
CCAAGAGTGT CAAGATCGAG TGCTCTTGCT TCAAAAGCAA CCGGTTATCC AATTGCCAAG
ATGGCAGCTA AAATTGCAAT CGGAATGACT TTAGATGAAA TTAAGAACCC AGTAACTGGA
ACAACTTATG CAGAATTTGA ACCAGCATTA GACTATGTTG TCTGCAAAAT TCCACGCTGG
CCATTTGATA AGTTCTCTAA GGCTGATCGC ACTTTGGGCA CGCAAATGAA AGCAACCGGT
GAAGTGATGG CAATTGGTCG AACTGCTGAA GAAGCAATGC AGAAAGCAGT AAGGTCACTT
GAGATTGATG AAAAAGATTT ATATTCAGAA AAAGCTCACA AAGCAAGTGA TGAAGAAATT
GAGCAAAAAC TAGTTAAAGC ACAAGATGAT CGTCTCTTTT ATTTAGCTGA AGCCTTTAGA
AGAGGGTATA GTCTTGAAGA TGTACACGAA TTAACGAAGA TCAACTTTTA TTTCTTAGAT
ATTGTGAGTC ATATGGTTGA AATGGAAAAG ACCATTAAAG AAAATAAGGA TGATCTTGAA
ACTTTACGTT TAGCTAAAAA ATATGGTTTT AGCGATCCAA CTATAGCTGC TTTATGGAAT
GAAAAAGCTG ACCAAGTTAG AGACTTACGT AAAAAACATG GTATCATCCC GGTTTATAAG
ATGGTTGATA CCTGCGCTGC TGAGTTTGAA TCAAAAACAC CATACTTCTA TTCAACTTAT
GATGGTGAAA ATGAATCACA TAAATCTGGT AAGAAATCAG TCGTTGTTAT TGGTTCTGGT
CCCATTAGAA TTGGACAGGG TGTTGAGTTT GATTATGCAA CAGTTCACTG TGTTAAAGCA
CTACAAAAAA TGGGCTATGA AGCAATTGTA ATTAACTCAA ATCCAGAAAC TGTTTCAACT
GACTTCTCAA TTTCAGATAA GCTTTACTTT GAACCTTTGA CTTTAGAAGA TGTTTTGAAT
GTTTGTGATT TAGAAAAACC AGAAGGTGTT ATTGTTCAAT TTGGTGGTCA GACTTCTATT
AACCTTGCAG CTGGTTTAGA AAGACATGGA GTTAAAATTT TAGGAACGAC AGTTAAAGAT
CTTAACCGTG CAGAAGACCG TGAATTGTTT GATCAAATTA TTAAAAAGCT TAAGCTTAAT
CAACCAAAAG GATTGACTGC TACGACGCAT GAAGGCGTAA TTAAAGCAGC TGAAGAGTTG
GGATATCCTG TCTTAGTTCG TCCAAGTTAT GTGCTTGGTG GAAAAGCAAT GGAAATTGTT
TATAACAAGA GCGAACTAGA AGAATACTTA CACGATCATG TAGATATTGC TGCTGATCAC
CCAATTTTAG TTGATGATTA TTTAGATGGC CGTGAATGTG ACGTTGACGC AATTTGCGAT
GGTAAAGATG TTCTGTTGCC TGGAATTATG GAACACATTG AACATGCTGG TGTTCACTCA
GGTGACTCAA TGGCGGTATA TCCTCCGCAA ACATTTACTG ATGACGTTAA AGAGAAGATT
ATGGACGTTA CTCGGAAATT GGCGCTTACT CTTAACTGTG TTGGAATTAT GAACATTCAG
TTTATTGTTA GAAATGGTGA AGTATACGTA ATTGAAGTAA ACCCTCGGGC AAGTAGAACA
GTACCATTTT TAAGCAAGAT AACCGGAATT GAAATGGCGC AAGTTGCAAC TAGAGTAATT
ATGGGTGAAA GCTTAGCTGA GCAAGGCTAT AGCGATGGTC TTGCACCAGA GCCAGAAATG
ATTAGCGTTA AGGCTCCTGT GTTTAGCTTT AGTAAGTTGG CTGATGTTGA TTCATATCTT
GGACCTGAAA TGAAGTCAAC TGGTGAAGTA ATGGGAAGCG ACCATACTTT TGCTAAAGCA
CTTTATAAGG CCTTTGCTGG AGCTAAAATG CAGATACCTG AAAACGGAAA TGTTTTATTG
ACAATTGAAG ATAGAGATAA AGACAAAATT TTACCGATTG CTAAGCGTTT TGCTAGAATT
GGCTATCGGA TCTTTGCTAC TAAGGGTACA GCTGAATTTT TAAAGAGTAA TGGTTTGCAT
GTTGATCTAG TAACTAAAGT TCATGAAGGC GAAAATAAAG ATGATAATAT CTTGAATGAA
CTGAGAGATG GAAAGATTGA CTTAGTAATT AATACTATGG GACATGATAT TGAAAAGAAT
TCAGATGGCT TTATTATTAG ACGGATGGCT ATTCAACAAA ATGTTCCTTT GTTAACTGCT
CTTGACACAG CCGATGCTCT TTTAACTGCT CTTGAAAATA GATCATTTGC GACAGACGCC
TTAAAATAA
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| Protein sequence | MPKRTDIHKI MVIGSGPIII GQAAEFDYSG TQACLALREE GYEVVLVNSN PATIMTDTTI
ADKVYIEPLT VESISRIIRQ EYPDAILPTL GGQVGLNMAL ALAKTGILDE LNIELLGTKL
SSIEQAEDRE KFKELCKKLG EPVPPSKTVN TVEDALAFGD EIGYPIIVRP AFTMGGTGGG
ICHSHEELAE IAKNGLELSP VTECLIEKSI AGYKEIEFEV MRDHDDNAMI VCCMENFDPV
GIHTGDSIVF SPSQTLSDKE YQMLRDCSLR LIRALKIEGG CNVQLALDPN SFDYDVIEVN
PRVSRSSALA SKATGYPIAK MAAKIAIGMT LDEIKNPVTG TTYAEFEPAL DYVVCKIPRW
PFDKFSKADR TLGTQMKATG EVMAIGRTAE EAMQKAVRSL EIDEKDLYSE KAHKASDEEI
EQKLVKAQDD RLFYLAEAFR RGYSLEDVHE LTKINFYFLD IVSHMVEMEK TIKENKDDLE
TLRLAKKYGF SDPTIAALWN EKADQVRDLR KKHGIIPVYK MVDTCAAEFE SKTPYFYSTY
DGENESHKSG KKSVVVIGSG PIRIGQGVEF DYATVHCVKA LQKMGYEAIV INSNPETVST
DFSISDKLYF EPLTLEDVLN VCDLEKPEGV IVQFGGQTSI NLAAGLERHG VKILGTTVKD
LNRAEDRELF DQIIKKLKLN QPKGLTATTH EGVIKAAEEL GYPVLVRPSY VLGGKAMEIV
YNKSELEEYL HDHVDIAADH PILVDDYLDG RECDVDAICD GKDVLLPGIM EHIEHAGVHS
GDSMAVYPPQ TFTDDVKEKI MDVTRKLALT LNCVGIMNIQ FIVRNGEVYV IEVNPRASRT
VPFLSKITGI EMAQVATRVI MGESLAEQGY SDGLAPEPEM ISVKAPVFSF SKLADVDSYL
GPEMKSTGEV MGSDHTFAKA LYKAFAGAKM QIPENGNVLL TIEDRDKDKI LPIAKRFARI
GYRIFATKGT AEFLKSNGLH VDLVTKVHEG ENKDDNILNE LRDGKIDLVI NTMGHDIEKN
SDGFIIRRMA IQQNVPLLTA LDTADALLTA LENRSFATDA LK
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