Gene LGAS_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1086 
Symbol 
ID4439689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1093080 
End bp1093616 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content36% 
IMG OID639672927 
Productbifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 
Protein accessionYP_814897 
Protein GI116629725 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones103 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG AAATTTGGGA CAAGCTTGCA ATGAAGCGAG CTCTTGTCAG AATTACGTAT 
GAAATTATTG AAAGAAATAA GGGAGTAGAA GATCTAGTCT TAGTTGGTAT TAAGACGCGC
GGAGTATATT TAGCTCGTAG AATGCGTGAT AGGCTGAAAG AAGTCGAAAA AGTAGATGTT
CCAGTAGGTG AATTAGATAT TACGCCTTAT CGGGATGATC GAAAAAAAGA TTTTAGTCAA
GAAAAAATAC CTGATTTAGA GCCGATGGAT CTAGATATTA CTAATAAAAA TGTTGTTTTA
GTAGACGATG TTCTCTATAC TGGTCGTACA ATTAGGGCAG CGATGGATGC CCTGATTGCA
AATGGACGAC CAAAGTCGAT TTCTGTAGCG GTTTTAGTCG ATCGGGGACA TCGAGAATTA
CCGATCAAAG CTGATTTTGT TGGTAAAAAT ATTCCAACTT CACTTAATGA GCAAGTGTCA
GTTAATGTCA GTGAAATTGA TGGTGTTGAT AGTATTGAAT TAATCAATTT AAAGTAG
 
Protein sequence
MTKEIWDKLA MKRALVRITY EIIERNKGVE DLVLVGIKTR GVYLARRMRD RLKEVEKVDV 
PVGELDITPY RDDRKKDFSQ EKIPDLEPMD LDITNKNVVL VDDVLYTGRT IRAAMDALIA
NGRPKSISVA VLVDRGHREL PIKADFVGKN IPTSLNEQVS VNVSEIDGVD SIELINLK