Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1083 |
Symbol | |
ID | 4439721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1088825 |
End bp | 1089496 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639672924 |
Product | DNA alkylation repair enzyme |
Protein accession | YP_814894 |
Protein GI | 116629722 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGAAA TAAGTAAGTA TCAACGATTA AGAAAGAAAT TAATCGAGAA TAGTGATCCA GAACTAGCTA GACAAATGGA AAGCTATATG AGAAATAAGT TTAAATTTTA TGGTTTGAAG ACCCCAGAAC GTCGGAAAAG CTATCATGAT CTTATTAAGT TAGAAAAAGC GAATAAAAAA ATTGATTGGA AATTTTTAGA TCAAGCCTGG GTAGATGAAC ATCGTGAAGC TCAATATTTT GTTTGTGACT ATTTAATTGC ACTAGAAAAA TATCTCAAAT TTGAAGATAT TGACCATATT TTTAATTATG TAAAGTCTAA ACAATGGTGG GATACAATTG ATAGTTTAAT TAAGCCAATT GGAAATATTG GTTTAAGGGA TGATCGAGTA AGCGATTTAA TGTTAGTTTG GTCAAAGGAT GACGATTTTT GGGTCAGAAG AGTAGCAATT GAGCATCAGC TTTTGCGTAA AGATAAAATG AATGTTGAAT TATTAAATGC AATTTTAGAA AACAACTTGG GTAATTCAGA ATTCTTTATT AATAAGGCAA TTGGCTGGGC ACTACGTGAT TATTCTAAAA CTAATCCAGA TTGGGTAAAA AATTTTATTA GCAAGCATCA TACTGAGATG GCAACTCTTT CAATTAAAGA AGGAAGTAAG TATTTATCAT GA
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Protein sequence | MKEISKYQRL RKKLIENSDP ELARQMESYM RNKFKFYGLK TPERRKSYHD LIKLEKANKK IDWKFLDQAW VDEHREAQYF VCDYLIALEK YLKFEDIDHI FNYVKSKQWW DTIDSLIKPI GNIGLRDDRV SDLMLVWSKD DDFWVRRVAI EHQLLRKDKM NVELLNAILE NNLGNSEFFI NKAIGWALRD YSKTNPDWVK NFISKHHTEM ATLSIKEGSK YLS
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