Gene LGAS_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1083 
Symbol 
ID4439721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1088825 
End bp1089496 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content30% 
IMG OID639672924 
ProductDNA alkylation repair enzyme 
Protein accessionYP_814894 
Protein GI116629722 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGAAA TAAGTAAGTA TCAACGATTA AGAAAGAAAT TAATCGAGAA TAGTGATCCA 
GAACTAGCTA GACAAATGGA AAGCTATATG AGAAATAAGT TTAAATTTTA TGGTTTGAAG
ACCCCAGAAC GTCGGAAAAG CTATCATGAT CTTATTAAGT TAGAAAAAGC GAATAAAAAA
ATTGATTGGA AATTTTTAGA TCAAGCCTGG GTAGATGAAC ATCGTGAAGC TCAATATTTT
GTTTGTGACT ATTTAATTGC ACTAGAAAAA TATCTCAAAT TTGAAGATAT TGACCATATT
TTTAATTATG TAAAGTCTAA ACAATGGTGG GATACAATTG ATAGTTTAAT TAAGCCAATT
GGAAATATTG GTTTAAGGGA TGATCGAGTA AGCGATTTAA TGTTAGTTTG GTCAAAGGAT
GACGATTTTT GGGTCAGAAG AGTAGCAATT GAGCATCAGC TTTTGCGTAA AGATAAAATG
AATGTTGAAT TATTAAATGC AATTTTAGAA AACAACTTGG GTAATTCAGA ATTCTTTATT
AATAAGGCAA TTGGCTGGGC ACTACGTGAT TATTCTAAAA CTAATCCAGA TTGGGTAAAA
AATTTTATTA GCAAGCATCA TACTGAGATG GCAACTCTTT CAATTAAAGA AGGAAGTAAG
TATTTATCAT GA
 
Protein sequence
MKEISKYQRL RKKLIENSDP ELARQMESYM RNKFKFYGLK TPERRKSYHD LIKLEKANKK 
IDWKFLDQAW VDEHREAQYF VCDYLIALEK YLKFEDIDHI FNYVKSKQWW DTIDSLIKPI
GNIGLRDDRV SDLMLVWSKD DDFWVRRVAI EHQLLRKDKM NVELLNAILE NNLGNSEFFI
NKAIGWALRD YSKTNPDWVK NFISKHHTEM ATLSIKEGSK YLS