| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1080 |
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| Symbol | |
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| ID | 4439718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1085283 |
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| End bp | 1087862 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639672921 |
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| Product | peptide ABC transporter permease |
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| Protein accession | YP_814891 |
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| Protein GI | 116629719 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0653596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAGA TGAGTAAAAA AATTTTATGG AAAGATGCTA TCAATTCACT CACTAATTCT
TGGGGACGTT TTATTGGGAT TATGTTATTA ATGGCAGTTA GTGCTTTTGC CTTTATTGGT
TTAAAGATGG CTGGTCCAGA CATGAGAAAT ACCGCTCAAA GTTATTATCA AAATGTAAAT
TTGGCAGATT TAACAGTCAG TTCAAATTAT GGTCTTGATA AAAATGATCT TCAAACGCTT
AGGAATCACG CTAAAAATTC AACATTAGAT TTGGGATATT TGCAAGATAC AAGCGTTAAT
AATTCAAAGA CTAGCCTGCG TCTTTTATCA GAAACCAAAA ATATTTCCAC TAATCAAGTA
GTTAGTGGTA AGTTGCCCAA TAAGAATAAC CAAATTGCGA TTAGTTATTT ACTTAAAAAC
AAATATCGTT TAGGGGAATG GATTAAGTTA GATGATCATA ATAATTTGAA AACTAATCGT
TTTAAAGTTG TTGGTTTTAT TCGACCAAGC GAATATACGG ATAAAAGCAA TATCGGTCAA
ACTACTGTCG GAACTGGTCA ACTTTCAGGA ATTGCAGTAG TGAAAAAGAG TGCTTTTAAT
TCTTCAAATT ATAGTATTGC TCGCATTCGT TTTGATAAAA CTAAAAATTT AGATCCATAT
TCTAGTGCTT ATCAAAGAAT CATTGATGAT AAAAAGAAAA AGCTTATTAA AGCCCTAGAT
AGAAATGGCA GAACAAAGAA AATAGAACTT GATAAGAATT TAGTATCAGC TCAAAAGCAA
CTTAATCAGG CTAGGCAGCA AGTTCAGTTA GCTGAAGTTA ATGGCTTAAA CGTAGTTGAG
CAAAAAGCTC AATTAGAAAA ACAGGAAAGC AAATTAAGTA AGCAAAAATG GCAAATCAAG
CAATTGGGCA ATGTTTCTTA TTATGTTAAT GATCGTAAAA ATGATCCTGG CTATGATACT
TACCAGTCAA ATTCAGAAAA AATTGAATTA ATTACTGACA TTTTTCCAGT TTTTCTATTT
GCAGTAGCAG CTTTAGTCAG TTTTTCAACT ATGACACGCT TCATTGATGA AGAAAGACAA
AATATTGGTG TTTTAAGAGC TTTAGGATAT AGCAAGTTAG ACACTAGTCT AAAATTTATT
GTTTATAGCT TAACCGCCGC TTTAACGGGC GTTTTGATTG GTGCAATTGG AGGCTATTGG
TTATTACCGC GGATAATATT TAATTCTTAT ACTGCTAATC TAACACTGAC GAATTTTCAG
ACTTTATTTT CATGGAAGTA TTTATTTTTA ACTATCTTAA TTGCAGTTTT ATGTACAACG
GGTGCAGCTT TAATTCAACT ATTTTTGGTT TTAAGAGCAA AAACAAGCGA ATTATTGTTG
CCAAAACCAC CAAAGAATGG CTCGCGAATT TTCTTAGAAA GAATCAAACC ACTTTGGCAA
AATTTAAGCT TTAACTATAA AGTTACGTTA AGGAATATTT TTCGTTATAA AGTAAAAATG
ATCATGACAA TTCTGGGCAT CGCGGGATGT ACTGGCTTAT TGATGATGGG ATTCGGTATT
CGTGATTCAC TAGCAGGTAT TGGTCAAAAA CAATATGGCG AGCTTATTAA GTATGATTTA
GTTGCAGTTG ATAAAAATGA TTTGTCTAAG AGTCAGAGCA GAAAGTTAAA GCAAAAGCTT
GGTTCAAAGC AAATAAATAA GTATTTACCA GTACATTTTG AAAATATTAC TAAAAAGATC
GACGGAACGA AACAAAATAT TTCAATAATC GTGCCAAAGA AAGATCAAAA TATTAACGAC
TACATTAATC TAAGAAATAG ACAGTCAGGT CAAAAAATCA ACTTGAATAA TCATGGCGTG
GTTATTTCTG AAAAGCTGGC TAATCTCTTA CATTTAAAGC CTGGCGATAA GTTAATTTTA
AAATTGAATA ATGGTAAGAA AGTTAAACTG CCAATTAGTC GGATTTGTGA AATGTATATG
GGACATTATG TCTTGATGAA TTCAAATGTC TATGAGAGAT ATTTTGACCA GAAAATGAAT
ACCAATGCCC AGTTAATTGA ATTAAAGTCA GACGTTCAAA CTGATGATTT TGCTAATTCG
TTGATGAAAA CTGGCGCAGT TAATGCAATT AATTTAAATA CTAGCAATAA GCAAATAATT
GATAGCCTAA TTCAAAGTAT GGATAAGGTG ATGTTCCTGT TAATTGGTTT AGCAGTCCTT
TTAGCAATTG TTGTGATTTT TACCTTAACT ACAACAAATT TAGAAGAGCG AATGAGAGAA
ATTTCTACTT TGAAAGTTTT AGGTTTCTAT AATAAAGAGG CTAGTCTATA TATTTATCGT
GAGACGATCA TTCTCTCAAT TTTAGGTATT TTATTTGGCT TTTTAATTGG AAATTGGCTG
CATAGTTTTA TTATTGACAA TTTAGCTCCG ATGAATGCGA TGTTTAGACC TGGAATTTTA
TTTAGCAATT ATCTTTTGTC AGCAATAATT CCGCTGGCAA TTACAGCAAT CATGGCAATT
TTTGTGAGCC GTGAAATTAA AGAAGTCAAT ATGCTTGAAG CTTTGAAGTC TGTAGACTAA
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| Protein sequence | MSEMSKKILW KDAINSLTNS WGRFIGIMLL MAVSAFAFIG LKMAGPDMRN TAQSYYQNVN
LADLTVSSNY GLDKNDLQTL RNHAKNSTLD LGYLQDTSVN NSKTSLRLLS ETKNISTNQV
VSGKLPNKNN QIAISYLLKN KYRLGEWIKL DDHNNLKTNR FKVVGFIRPS EYTDKSNIGQ
TTVGTGQLSG IAVVKKSAFN SSNYSIARIR FDKTKNLDPY SSAYQRIIDD KKKKLIKALD
RNGRTKKIEL DKNLVSAQKQ LNQARQQVQL AEVNGLNVVE QKAQLEKQES KLSKQKWQIK
QLGNVSYYVN DRKNDPGYDT YQSNSEKIEL ITDIFPVFLF AVAALVSFST MTRFIDEERQ
NIGVLRALGY SKLDTSLKFI VYSLTAALTG VLIGAIGGYW LLPRIIFNSY TANLTLTNFQ
TLFSWKYLFL TILIAVLCTT GAALIQLFLV LRAKTSELLL PKPPKNGSRI FLERIKPLWQ
NLSFNYKVTL RNIFRYKVKM IMTILGIAGC TGLLMMGFGI RDSLAGIGQK QYGELIKYDL
VAVDKNDLSK SQSRKLKQKL GSKQINKYLP VHFENITKKI DGTKQNISII VPKKDQNIND
YINLRNRQSG QKINLNNHGV VISEKLANLL HLKPGDKLIL KLNNGKKVKL PISRICEMYM
GHYVLMNSNV YERYFDQKMN TNAQLIELKS DVQTDDFANS LMKTGAVNAI NLNTSNKQII
DSLIQSMDKV MFLLIGLAVL LAIVVIFTLT TTNLEERMRE ISTLKVLGFY NKEASLYIYR
ETIILSILGI LFGFLIGNWL HSFIIDNLAP MNAMFRPGIL FSNYLLSAII PLAITAIMAI
FVSREIKEVN MLEALKSVD
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