Gene LGAS_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1076 
Symbol 
ID4439714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1078973 
End bp1080460 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content34% 
IMG OID639672917 
Productthreonine synthase 
Protein accessionYP_814887 
Protein GI116629715 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000688351 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATC GTAGTACACG CGCTAACTTA AATTATCAAT TAGATGCTCC CGCAGCTATT 
ATTCAAGGAT TATCACCAGA AGGTGGTCTT TTTGTTCCAA CTACTTTTCC TAAGCCAATT
TTTGATTTAG AACAATTTAA AAATATGTCC TACCAAGAAA TGGCTAAAAA AGTTTTAGCA
ACCTTCTTTG ATGATTTCTC AGATGAACAA CTTACTCAAA TTGTAGGCGA ATCTTATGGT
AATCAATGGG ATGATAAAGA AGTTGTCAAA ATTACTAAAC ATGCAAACAA TTATTATCTA
GAACTCTTCC ATGGTCCAAC GCTTGCCTTT AAAGATATCG CCTTACAAGT ACTTCCTCGT
TTAATGCATA CAGCTATCAA AATCAAACAA AATGATTCTG ATATCATTAT TCTAACTGCT
ACTTCAGGAG ACACTGGCGG TGCAGCAATG AGTGGTTTTA AAGGTCAAGA CCATACTCAC
GTTATTGTCT TCTACCCTTA CGGCGGTGTA AGTCCCGTAC AATTAAGACA AATGCTAGGT
CTTAAAGGCG GTAACTTAAC TGCGATTGCC ATTAAAGGTA ACTTTGATGA TGCTCAAACT
AACGTGAAGA AAATTTTTAA TAATCAAGCT TTAGTTAAAA AATTAAAACT AAACAAATTG
CAATTTTCTT CCGCTAATTC AATGAATATT GGCCGCTTAA TCCCGCAAAT TGTCTATTAT
TTTTATAGTT ATGTTCAACT AGTTAAAAAT GGTCAAATTT CAGCTGGACA AGAAATTAAT
TTTTCCGTTC CAACTGGGAA CTTTGGCGAT ATTCTTGCGG GCTACTATGC TAGAAAATTA
GGGCTACCAA TTCATAAACT TATTTGTGCT TCTGATCAAA ATAATGTTTT GACTGATTTC
TTTGAAACTG GTACTTATGA TCGTCAACGT AAGTTTTACT TAACTAACTC CCCTGCCATG
GATATCTTAG TTTCAAGTAA TTTAGAGCGA TTATTGTTTG ACCTTTATGA TGAAAACGCT
GATGAACTAT CAAAATTAAT GAATAAATTA AGCAAGGAAG GAAAATATAC AATCAGTCCA
GCTGTTAAGG AAAAATTAGC TCAGTTATTT GCAGCTGGTT TTGCTACAGA GGATGAAGTT
GAAACTGAAA TTAAACGTAT CTATGAAAAA GATCATTACA CACTCGATCC ACATACAGCA
GTTGCCTCTT TTGTAACTAA AAAGTATCAA GAAATTAGTC TTGATCAAAC ACCAACTGTG
ATCGTTTCAA CTGCTAGCCC ATATAAGTTC CCTGAAACAG TCTTTCATGC ACTTACTGGT
AAAGAAGTAA AAGAAAAAGG CGTTCCTGCT ATTAAAGAAT TGAATAGCTT CTTAAAAGAA
GACTTAAGCG GGAATGTAAA CAATTTGATT CAAACTGGTA ATTATCAAGA GCAAATAATT
GATGCTAGCG AAATGGAAAA TGCTTTACTT AATATTTTAG ATATCTAA
 
Protein sequence
MQYRSTRANL NYQLDAPAAI IQGLSPEGGL FVPTTFPKPI FDLEQFKNMS YQEMAKKVLA 
TFFDDFSDEQ LTQIVGESYG NQWDDKEVVK ITKHANNYYL ELFHGPTLAF KDIALQVLPR
LMHTAIKIKQ NDSDIIILTA TSGDTGGAAM SGFKGQDHTH VIVFYPYGGV SPVQLRQMLG
LKGGNLTAIA IKGNFDDAQT NVKKIFNNQA LVKKLKLNKL QFSSANSMNI GRLIPQIVYY
FYSYVQLVKN GQISAGQEIN FSVPTGNFGD ILAGYYARKL GLPIHKLICA SDQNNVLTDF
FETGTYDRQR KFYLTNSPAM DILVSSNLER LLFDLYDENA DELSKLMNKL SKEGKYTISP
AVKEKLAQLF AAGFATEDEV ETEIKRIYEK DHYTLDPHTA VASFVTKKYQ EISLDQTPTV
IVSTASPYKF PETVFHALTG KEVKEKGVPA IKELNSFLKE DLSGNVNNLI QTGNYQEQII
DASEMENALL NILDI